Callithrix jacchus (white-tufted-ear marmoset): 100414495
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Entry
100414495 CDS
T03264
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X6
KO
K20225
capicua transcriptional repressor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100414495 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100414495 (CIC)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100414495 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100414495
NCBI-ProteinID:
XP_002762238
Ensembl:
ENSCJAG00000012847
UniProt:
F7D5W2
LinkDB
All DBs
Position
22:35885382..35913396
Genome browser
AA seq
1610 aa
AA seq
DB search
MYSAHRPLMPASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPPHPLGVVEPG
KGLPPTTEEEAPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDPKAPGSSSCGAERLHTVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSSTQYGAPGPFAAPGEGGALAATGRPPLL
PTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKEQVTDSESGDS
SGEDPEGNKGFGRKVFSPVIRSSFTHCRPSMDPEPPGPPDPPAAFGKGYGSTPSSSSASS
PASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAAGPATPSKATRFLPTDPATF
RRKRPESVGGLEPAGPSVIAAPPSGGGSILQTLVLPPNKEEQEGGGARVPSAPTPSLAYG
APAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGTGSRVP
GGSPLGVSLVYSDKKSATATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPVPPAV
QFIAQGAPGGGTSAGSGAGAGSGPNGPVPLGILQPGALSKAGGITQVQYILPTMPQQLQV
APAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPP
KAQSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQ
PPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHALPLG
TSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSP
QLPSACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGP
TAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASG
RPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPPPETWTPMARSSPPPPLPAEERTS
AKGPETMASKFPSSSSDWRVPGQGLESRGEPPTPPSPAPAPAVAPGGSSEGSGGRAAGDT
PERKEAASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQS
LATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFT
FDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYA
DIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAAPAPTPSPAGGPD
PTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPGPSTAATGR
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggcccacaggcccctgatgcccgcgtccagcgcggcctcccgtggcctcggc
atgttcgtgtggacgaatgtggaacctcgctctgtggccgtgttcccctggcactcctta
gtccccttcctggcacccagccagcctgacccctccgtgcagccgagtgaggcccagcaa
cctgccagccacccagtggcctccaaccagagcaaagaacctgctgaatcggcagctgtt
gctcatgagcggccaccaggtgggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccagggcccggacccccacatcctttgggggtggtggaacctggt
aagggtctacctcccaccacagaggaggaggcccccgggcccccaggagagtcccggctg
gacagtgagacagagagtgaccatgatgatgccttcctctccatcatgtctcctgagatc
cagttgcctcttccgcccggaaaacgtcggacccagtccctcagtgccctacccaaggaa
cgagactcatcttctgagaaggatggacgcagccccaacaagcgagagaaggaccacatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcatcccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtatgcc
ctggggcccaaggagaagcagaagtaccacgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcagag
gccaagcccacgagcctggggctggcaggagggcacaaggagacgcgggagcgaagcatg
tcggagacgggcactgccgctgcccctggggtgtcctctgagcttctgtctgttgcggcc
cagacactcctgagctcggaccccaaggctccagggagtagctcctgtggggcggaacgg
ctgcacacagttgggggacctggctcagcccggccccgagccttctcccacagtggggta
cacagcctggacggtggagaagtagacagtcaggcactacaggaactgacgcagatggtg
tctggccctgcatcgtactctggtccaaagccttcttctacccagtatggagctccaggc
ccctttgcagcccccggtgagggaggtgctctggcagccactggacggcccccactgctg
cccactcgagcttctcgttcccaacgtgcggccagtgaggacatgacgagtgatgaggag
cgcatggtcatctgtgaggaggaaggggatgatgatgtcattgctgacgatggcttcagc
accactgacattgatctcaagtgcaaggagcaggtgaccgacagtgagagtggggacagc
tctggggaggacccagaaggcaacaagggctttggtcggaaggtgttttcacctgtgatc
cgttcctcctttacccattgccgcccctcgatggaccctgagcccccagggcccccggat
cctcctgcagcttttggcaaaggctatggttctaccccgtcttcctcctctgcgtcctcg
cccgcttcttcctcagcctcggcagccacctccttctctctgggctcaggaaccttcaag
gcccaggagtctggtcagggcagcacagcaggccccctgcggcccccgccccctggggct
gcgggcccagcgacaccttccaaggcgacccggttcctcccaacggatcctgccaccttc
cggcgcaagagacctgaaagtgtgggcggcctggagccagcaggcccctctgtcatcgcg
gcccctcccagcggaggaggaagcatcctgcagacactggtgctgcccccaaacaaggag
gagcaagagggcggcggagccagagtaccctcggcccccaccccgtcactggcctatggg
gccccggcagctcccctgtcccgtcctgccgccaccatggtcaccaacgtggtgcggcct
gtcagcagcactcctgtgcccatcgcctctaagcccttccccacctctggccgggctgag
gcatctccaaatgacacagcaggtgccaggactgaaatgggcactgggtctcgggtgcct
gggggctccccgctgggtgtcagcttagtgtattcggacaagaagtcggcaacagccacc
tcaccagccccacacttggtggctggacccctgctgggcactgtggggaaggcgcctgcc
actgtcacaaacctgctggtgggcaccccagggtatggggcccctgtgccccctgctgtc
cagtttattgcccagggggcccctggcggtgggacctctgcaggctcaggagcaggtgct
gggagtggccccaatgggccagtacccctgggcattctgcaaccaggtgccctgagcaag
gctgggggaatcacccaggtgcagtacatcctgcccacgatgccccagcagcttcaggtg
gcacctgccccagcaccagcccctgggaccaaggcagcggctcccagcggccctgcaccc
actaccagcatccgtttcaccctcccaccgggcacttccaccaacggcaaagtcctggcc
gccactgcacccactcctggcatccccatcctgcagtctgtaccctccgccccacccccc
aaagcccagtcagtttctcccgtgcaggccccgcccccaggtggctcagcccagctgctt
cccgggaaggtcctagtgcccctggccacccctagcatgtcagtgcggggtggaggggcc
ggccagccactgcccctggtgagcccgcccttctcagtacctgtgcagaatggtgcccag
ccacccagcaagatcatccaactgaccccagtgcctgtgagcacacccagcggcctggtg
ccgcccctgagcccagccacactccctggacccacctcacagccccagaaggtcctactg
ccctcttccaccagaatcacctatgtgcagtcagcgggcgggcacgcgctgcccctgggt
accagccctgcatccagccaggctggaacagtcacctcgtacgggcccacgagctctgta
gctctaggcttcacctcattggggcccagcggccccgccttcgtgcagcccctgctctca
gcaggccaagccccactgctggctcccggtcaggtgggcgtgtcgcctgtgcccagtccc
cagctgccatctgcttgtgcagcccctggaggtcctgtcatcacagcattttactctggc
agccctgcacccacctcctcagcacccctggcccagccatcccaggcccccccaagcctg
gtctacactgtggccaccagcacaactccacctgcagccaccattctgcccaagggcccg
actgcccctgccactgccaccccagccccaactagccctttcccgagtgccacagcaggt
tccatgacgtacagcttagtggcccccaaggcccagcggcctagcccgaaggcaccccag
aaagtgaaggcggccattgccagcattcctgtggggtcctttgaggcaggtgcctctgga
cggcctggccctgcaccccggcagcctctggagcctggcccagtccgagagccaactgcc
ccagagtctgagcttgaggggcagcccacaccaccagcccctccacccccaccagagacc
tggactcccatggcccggagcagccccccaccgcccctacctgctgaggagcggaccagt
gccaagggtcctgaaaccatggctagcaaattccccagctcatcttcagattggcgcgtc
cctgggcagggcctggagagtcgtggggagcctcccacccctcccagcccagctccagct
ccagccgtagctcctggtggcagcagcgagggcagtggtgggcgggcggccggggacacc
cctgagcgcaaggaggcggctagtactggcaagaaggtgaaggtgcggcccccgcccctg
aagaagacctttgactctgtggacaacagggtcctgtcagaagtggactttgaagagcgc
tttgcagagctgcctgagtttcggcctgaggaggtgctgccttcccctaccctgcagtct
ctggccacctcaccccgggccatcctgggctcttaccgcaagaagaggaagaattccacg
gacctggattcagcacccgaggaccccacctcacccaagcgcaagatgaggagacgctcc
agctgcagctcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacc
tttgaccgtacaggtacagaagctgaggacgtgctgggggagctggagtatgagaaggtg
ccgtactcctccttgcggcgcaccctggaccagcgccgggccctggtcatgcagctcttc
caggaccatggctttttcccatcagcccaggccacagccgccttccaggcccgctatgca
gacatctttccctccaaggtttgtctgcagttgaagatccgtgaggtgcgccagaagatc
atgcaggcagccactcccacggagcagccccccggagctgaggcccccctccctggaccg
ccccccactggcaccgctgctgcccctgcccccactcccagccccgctgggggccctgac
cccacctcgcccagctcggactctggcacagcccaggctgccccgccactgcctccgcca
ccagagtcggggcctggccagcctggctgggagggggctccacagccctcccccccaccc
ccaggtccctccacagctgccacaggcaggtga
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integrated database retrieval system
