Callithrix jacchus (white-tufted-ear marmoset): 100414798
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Entry
100414798 CDS
T03264
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X2
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04140
Autophagy - animal
cjc04148
Efferocytosis
cjc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100414798 (VPS11)
04148 Efferocytosis
100414798 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100414798 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100414798 (VPS11)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100414798 (VPS11)
Hops complex
100414798 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
DUF1993
DUF5847
Motif
Other DBs
NCBI-GeneID:
100414798
NCBI-ProteinID:
XP_002754552
Ensembl:
ENSCJAG00000013850
UniProt:
U3C3H2
LinkDB
All DBs
Position
11:16509700..16522782
Genome browser
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPASGSAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRSSLEGRCDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQDPSLW
EQALSYFARKEEDCKEYMAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYRDETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTTRLTPSLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctacctgcagtggcggcgctttgtctttttcgacaaggagctggtgaaggag
ccgctgggcaatgatggggctgctcccggggccgcacctgcttctggatccgctgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggtcgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgttccctacagcttacaggcttc
caggcctataaactacgggtgacacacctgtaccagctgaagcagcacaatattctggca
tctgttggagaagatgaagagggcatcaacccactggttaagatctggaacctggagaag
agagatggcggcaatccactctgcactcgaatcttccctgctattccaggaacagagcca
actgttgtatcttgtttgaccgtccatgaaaatctcaactttatggccattggtttcaca
gatggcagtgtcacattgaacaaaggagatatcacccgggaccggcatagcaagacccag
attttgcacaagggcaactatcctgttactggattggcctttcgccaagcgggaaagacc
actcacttgtttgttgtgacaacagagaatgtgcagtcctatatagtttctggaaaagac
taccctcgcgtggagttggacacccatggttgtggcctgcgctgctcagccctaagtgac
ccttctcaggacctgcagttcattgtggccggggatgagtgtgtctacttgtaccagcct
gatgaacgtgggccctgcttcgcctttgagggccataagcttattgcccactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcacagagctctgataagcagattctaaacatctatgacctgtgcaacaagttc
atagcctatagcgctgtctttgaggatgtagtggatgtgcttgctgaatggggctcccta
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctatttgagatggcaattaacctggccaagagccaa
catctggacagtgatgggctggcccagattttcatgcagtatggagaccatctctacagc
aagggcaaccacgatggggctgtccagcagtatatccgaaccattggaaagttggagcca
tcctatgtgatccgcaagtttctagatgcccaacgcattcacaacctgactgcctatctg
cagaccctgcaccgacaatccctggccaatgctgaccataccaccctgctcctcaactgc
tataccaagctcaaggacagctcaaagctggaggagttcatcaagacaaagagtgagagc
gaagtccactttgacgtggagacggccatcaaggttctccggcaggctggctactactcc
catgccctgtatctggcagagaaccatgcacatcatgagtggtacctgaagatccagcta
gaggacattaagaattatcaggaagcccttcggtacattggcaagctgccttttgagcag
gcagagagcaacatgaagcgctatggcaagatcctcatgcaccacataccagagcagaca
actcagttgctgaagggactttgtactgattatcggtccagcctcgaaggccgctgtgat
agggaggccccaggatgcagggccaactctgaggagttcatccccatctttgccaataac
ccgcgagagctgaaagccttcctggagcacatgagcgaagtgcagccagactcaccccag
ggcatctatgacacactccttgagctgcgactgcagaactgggcccatgagaaggatcca
caggtcaaagagaagcttcacgcagaggccatttccctgctgaagagtggtcgcttctgc
gatgtctttgacaaggccctggtcctgtgccagatgcacgacttccaggatggtgtcctt
tacctctatgagcaggggaagctgttccagcagatcatgcactaccacatgcaacacgag
cagtaccggcaggtcatcaccgtgtgtgagcgccacggggagcaggacccctccttgtgg
gagcaggccctcagctactttgctcgcaaggaggaggactgcaaggagtacatggcagct
gtcctcaagcatatcgagaacaagaaccttatgccacctcttctagtggtacagaccctg
gctcacaactccacagccacactgtccgtcatcagagactacctggtccaaaaactacag
aaacagagccagcagattgcacaggatgagctgcgggtgcggcggtaccgagatgagacc
acccgcatccgccaggagatacaggaactcaaggccagtcctaagattttccaaaagacc
aagtgcagcatctgtaacagtgccttggagttgccctcagtccacttcctgtgtggccac
tccttccatcaacactgctttgagagttactctgaaagtgatgctgactgccccacctgc
ctccctgaaaaccggaaggtcatggatatgatccgggcccaggaacagaaacgagatctc
catgatcagttccagcatcagctcaagtgctccaatgacagcttctctgtgattgctgac
tacttcggcagaggtgttttcaacaaattgactctgctgactgaccctcccacaaccaga
ctgacccccagcctagaggctgggctgcagcgtgacctgctcatgcactccaggaggggc
acttaa
DBGET
integrated database retrieval system
