Callithrix jacchus (white-tufted-ear marmoset): 100414799
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Entry
100414799 CDS
T03264
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc05014
Amyotrophic lateral sclerosis
cjc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100414799 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100414799 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100414799 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100414799 (NUP98)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100414799 (NUP98)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100414799 (NUP98)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100414799 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
100414799
NCBI-ProteinID:
XP_009005753
Ensembl:
ENSCJAG00000015332
UniProt:
F6Z5L4
LinkDB
All DBs
Position
11:complement(65823824..65938971)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGSSTTSTPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPAPGTLGTGLGAGFGTALGAGQASLFGNSQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQVPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSSLFSPVNRDSETLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSRFYT
NPIAKPIPQTPESAGNKHNSSSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDREE
IENNSYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDV
NLTNLNLDDIVHIRRKEVVVYVDDNKKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPD
RLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTST
KKLKTAPLPPAGQTAPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDT
MLEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTEEEDIDMALDQRFSRLPSKAD
TSQEICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSASVQECRTPRTASLINIPS
TSSWSVLPPLASVFTMPSPAPEVPLKTVGTRRQLGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEKL
SLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKEASGDLP
EAQIVKHWSLTWTLCEALWGHLKELDSQLDEPNKYIQILERRRAFSRWLSHTATPQIEEE
VSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSIRELLTMQLVD
WHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAIHLWYLLPPTAS
ISRALNMYEEAFQNTSDSDRYACSPLPSYLEGSGSVIEEEQNSQTPLRDVCFHLLKLYSD
RYYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVLLHIDNSCIREKAVRELLTRHCQLLETPEYWAKETFLTQKLCVPAEWIHEAKA
VRAHMESDKHLEALYLFKAGHWNRCHKLIIRHLASDAIINEKYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVIDMLHRIQQVDCSGYDLEQLHIKVISLCSRIEQIQCYNAKDR
LAQSDMAKRVANLLRVVLSLHHAPDTTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDEL
RSLTQSYLRELAVGSL
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaacaccctttgggggtggcacaggtggctttggaacaact
tcaacatttggacagaatactggctttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcacagactaaaccagga
ggattatttggaaccaattcatttagccagccagctacctccacaagcactggctttggg
tttggtacatcaacaggaacatcaaatagcttgtttggaactgcaagcacagggaccagt
cttttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaaccagtactagcagtggaggactctttggaactacaaataccacctctaatcctttt
ggcagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
actattaaatttaaccctccaactggtacagatactatggtcaaagctggagttagcact
aacataagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgcttagaggattatcaggctaacaggaaaggcccacagaaccaggtggga
gcaggtaccacaactggcttgtttgggtcttctccagccacttccagtgcaacaggactc
ttcagctcctctaccactaattcaggctttgcatatggtcagaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccagcagaatcagcag
actaccagtctcttcagcaaaccatttggccaggccactaccacgcagaacactggcttt
tcctttggtaataccagcaccctaggacagccaagcaccaacaccatgggtttatttgga
gtaactcaagcctcacagcctggtggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagacaaatactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaagcagcacaaccagtaca
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttctaattttggttttggcacaaataccagtgggaatagtattttt
ggaagtaaaccagcacctggtactcttggaactgggcttggtgcaggatttggaacagct
cttggtgctggacaggcatctttgtttgggaacagccaacctaaaattggagggcctctt
ggtacgggagcctttggggcccctggatttaatactacgacagccactttgggctttgga
gccccccaggtcccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacatcaacagtctaacatactcaccttttggagactctcctctcttccga
aatcccatgtcagaccctaagaagaaggaagagagattgaaaccaacaaatccagcagcc
cagaaggctcttactacacctactcattataaactgacaccccgccctgccactagagtc
cggccaaaggctttacaaacgacaggcacagccaagtcacatctctttgatgggctagat
gacgatgaaccatccctagctaatggagcattcatgcccaagaagagcattaagaagttg
gttttgaagaaccttaataatagcagtctcttttctcctgttaatcgagattcagaaact
ctagcttcaccgtctgaatatccagaaaatggagagagatttagtttcctgagcaaacct
gttgatgagaatcaccagcaggatggagatgaagattcccttgtgtcacgtttttatact
aaccctattgccaaacctattcctcaaaccccagaaagtgctggaaataaacacaacagc
agcagtgtggatgataccattgttgcattaaacatgcgtgctgctttgcgaaatgggctg
gaaggaagcagtgaagaaacgtcttttcatgatgagtcacttcaggatgaccgagaagaa
atagaaaataattcttaccatatgcatccagcaggtatcgttctcactaaggttggttac
tatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagagtgcatt
gtctctgacttcactattggtcggaaaggttatggttcaatctattttgaaggagatgtg
aatttgacaaatctaaatttggatgatattgtgcatatccgaaggaaggaagtagttgtt
tacgtagatgataacaaaaaaccacctgtgggtgaaggactaaataggaaggctgaagtt
acattggatggagtttggccaacagataaaacatctcgttgtttaataaagagcccagat
cgccttgctgatatcaactatgaaggaagattggaagcagtttcaaggaaacagggagct
cagtttaaagaatatcgacctgaaactggttcttgggtgtttaaggtctcccatttttct
aagtatggccttcaggattctgatgaggaggaggaggagcatccatctaaaactagtaca
aagaagttgaagactgctcctttgcctcctgcagggcagactgcccctttccagatggct
cttaatggcaaacctgcacctccacctcagagccagagtccagaggtggagcagttaggg
agggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggatacc
atgttagaagagagcatgcctgaggatcaggaacctgtatctgcctcaacacatattgca
tcttcactgggaattaatccacatgtcttacagatcatgaaagcatcattgcttactgag
gaagaagatatagatatggcactggatcaacgcttcagtcgccttccttccaaagcagat
acttctcaagaaatttgttctcccagactccccatttcagcatcccactcatcgaaaact
cgttcactagttggtgggttactacaatcaaaatttacaagtggagcttttctttcacca
agtgcctctgtgcaagaatgtcgtactcccagaacagcatctttaattaatatcccatct
acatcctcttggtctgtccttccacccctggcttctgtgttcacaatgcccagcccagcc
cctgaggttccattgaaaacagtgggtacacgtaggcaactaggcctagtccctcttgaa
aagtctgtcacctatggcaagggaaaactcttgatggacatggccctattcatgggacgc
tcatttcgtgttggttggggccccaactggactcttgctaacagtggagagcagctgaat
ggctctcatgaactagaaaatcatcagattgctgattctatggagtatggattcctgccc
aatccagtagctgttaaatccctaactgagtccccattcaaagttcacttagaaaaactc
agtttgcgacaaaggaagccagatgaagacatgaaattataccagacacctctggagctc
aaattaaaacacagcactgtccatgtggatgaactgtgtcctctcattgtccccaatccg
ggagttgctgtcattcatgactatgcagattgggttaaagaagcatcaggagacttaccc
gaagcacaaattgtgaagcactggagcctgacatggacattatgtgaagcattatggggc
cacctgaaggagcttgacagccagctagatgaacccaataaatacattcaaattctagag
cggcgaagagctttctcccgctggctatcccatactgccacaccgcaaattgaagaggaa
gtctccttaacccaaaaaaacagccctgtggaggctgtattcagctacctcacaggcaaa
aggatcagtgaagcctgctctctggcccagcagtcaggtgatcatcgtcttgctcttctt
ttatctcagtttgtgggtagccagtccatccgggagctgctcaccatgcagttggtggat
tggcatcagctccaagcagactgcttcatccaggatgagagactgcgcatctttgctctg
ttggctggaaaaccggtgtggcagctctcagaacagaagcaaatcaacgtatgctctcag
ttggattggaaacgctccctggctatccatctttggtatttgcttccaccaacagcctcc
atttctagggctctcaacatgtatgaagaagcatttcagaacacctctgacagtgacaga
tatgcctgctccccacttccttcgtatctggagggttctggctctgtgatagaggaggag
caaaactcgcagacaccacttcgagatgtctgctttcaccttctaaaactctacagtgac
agatactatgatctcaaccagctgctggagcctcgaagcataacagcagatcctttggac
taccgcctaagctggcacttgtgggaagtgctgagggctcttaactacacccatctctca
gagcagtgtgaaggtgtgctacaggccagttatgctggccagctggaaagtgagggtctc
tgggagtgggccatctttgtcctcctgcacattgacaactcatgcatacgtgagaaggct
gttcgagagctgcttacccgacactgccagcttttggagaccccggaatattgggctaag
gagactttccttacccagaagctctgtgtgcctgctgaatggattcacgaggccaaagct
gtgcgagcacacatggaatctgacaagcacttagaggccctgtatttatttaaggctggg
cactggaaccgctgccacaagctcatcatccggcacttagcttctgatgccatcattaat
gagaaatatgactacctgaaggggttcttggaagacttggcacctccagagcgcagcagc
ctaattcaggattgggaaacatctggacttgtttacctggactacattagagtcattgac
atgctccaccgtatacagcaggtggattgctcaggttatgacctggagcagttacacatc
aaagtgatttcactgtgcagtcggatagagcagattcagtgttacaatgctaaggatcgc
cttgctcagtcggacatggcgaaacgtgtggccaacctgctacgggtggtgctgagtctg
catcatgctcctgatacaacctctgactcgacaccagaccctcagcgagttcctttgcgc
ctcttggctccccacattggccggctccccatgcctgaggactatgccatggatgaactg
cgcagccttacccagtcctatctgcgagaactggctgttgggagcctgtga
DBGET
integrated database retrieval system
