KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100414821
Entry
100414821         CDS       T03264                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cjc03009]
    100414821 (RRP9)
Ribosome biogenesis [BR:cjc03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100414821 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_SPT8 Trypan_PARP Beta-prop_RIG_2nd Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 100414821
NCBI-ProteinID: XP_002758446
Ensembl: ENSCJAG00000005736
UniProt: F7IHZ8
LinkDB
Position
15:complement(28247534..28255970)
AA seq 497 aa
MRGGFGCHVSSPVAASTHPVGSMSAKAAARKRGKLVSGAGAGAAAGKRRRKAASAGDRGK
SKGGTKMNEEISSDSESESLPPRRPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKA
EAQAFEEDQVAGRLKEDVLEQRGRLQKSVAKEIQAPASTDIRILRGHQLSITCLVITPDD
SVIFSAAKDCTIIKWSVESGRKLHVIPRAKKGAEGKSPGHSSHILCMAISSDGKYLASGD
CSKLILIWEAQSCQNLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVET
LFGHQDSVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHM
VSGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSS
CVRLWQCGEGFRRLDLLCDIPMVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNS
VCIIPLRRVPAPPAAGS
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgcggggagggttcggttgccacgtgagttctccggtggctgctagcacacacccggtg
ggcagcatgtcggcaaaagcggcggctcgtaagcggggaaagctggtttcgggggccggg
gctggtgcggcggccggcaagcggcggcgaaaggccgcctccgcgggggacaggggcaaa
tccaaaggtggcaccaagatgaatgaggagatctccagtgactctgagagcgagagccta
cctccaaggaggcctgaggaggaggaggaggaagagctggaggaaacagcccaggagaag
aagctgcgcttggccaagctctacctagagcagctccgacagcaagaggaggagaaggct
gaggcccaagcatttgaggaggaccaggtggcggggcgcctgaaggaggatgtgctcgag
cagaggggcaggctgcagaagtcggtggcaaaggagatccaggccccagcctcgactgac
attcgcattttacgggggcaccagctctcgatcacatgtttggtcatcacccccgatgac
tcggtcatcttctctgctgctaaagactgcaccatcattaagtggagtgtggagagtgga
cggaagctgcatgtgattcctcgagccaagaagggtgccgagggaaagtcccctggccac
agcagccacatcctctgcatggccatctcctctgacggcaagtaccttgcctctggtgac
tgcagcaagctcattctcatttgggaggcccagagctgccagaacctgtacaccttcaca
ggacaccgggatgcagtgtcggggctggcgttccgcagaggcacccaccagctctacagc
acatcccatgaccgctctgtgaaggtgtggaacgtggcggagaactcctacgtggagact
ctcttcgggcaccaggactctgtggctgcactagatgccctgagccgagagtgctgtgtg
acggccgggggccgggatgggactgtacgtgtgtggaagatccctgaggagtcccagctt
gtcttctacggccaccagggctctatcgactgcatccacctaatcaatgaggagcacatg
gtgtctggcgcagacgatggttctgtggccttgtggggcctctccaagaagcgaccactt
gccctgcagcgtgaagctcacgggctgcggggggagccaggcctggagcagcccttctgg
atatcatcggtggcagccctcctcaacacagatctcgtggccacaggctcccacagctcc
tgcgtgcggctttggcagtgtggggaaggtttccggcggcttgaccttctctgtgacatc
cccatggtgggttttattaacagcctcaagttctccagctctggggacttcctggtagct
ggggtggggcaggaacacaggcttggccgatggtggcgaatcaaagaggctcggaactct
gtctgcatcatcccactccgcagggtccctgcacccccggctgccggctcctga

DBGET integrated database retrieval system