Callithrix jacchus (white-tufted-ear marmoset): 100414871
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Entry
100414871 CDS
T03264
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100414871 (FMR1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100414871 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
100414871 (FMR1)
mRNA cycle factors
Stress granule specific factors
100414871 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
100414871
NCBI-ProteinID:
XP_008988243
Ensembl:
ENSCJAG00000003925
UniProt:
A0A2R8MBF6
LinkDB
All DBs
Position
X:139877912..139915845
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AA seq
650 aa
AA seq
DB search
MCVISLPTTTLGGWSSSLFADEESEVQRSLLEVPVRLRIKFNSGPFSVVCSMWLLKAFVK
DVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWL
AKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLRQMC
AKESAHKDFKKAVGAFSVTYDPENYQLVILSISEVTSKRAHMLIDMHFRSLRTKLSLILR
NEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCT
FHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAE
NEKNVPQEEEIIPPNSLPSNNSRIGPNAPEEKKHLDIKENSTHFSQPNSTKVQRGMVPFV
FVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYV
TDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEER
ESFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRV
DCNNERSVHTKTLQNTSSEGNRLRTGKDRNQKKEKPDSVDGQQPLVNGVP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtaatttcattacccacaacaaccttaggaggctggtcgagttccttatttgca
gatgaggaatctgaggtccagagatcacttcttgaagtgcctgtgagattgagaattaaa
ttcaattctggaccgtttagtgttgtttgcagcatgtggttgttaaaggcatttgtaaag
gatgttcatgaagattcaataacagttgcatttgaaaacaactggcagcctgaaaggcag
atcccattccatgatgtcagattcccacctcctgtaggttataataaagacataaatgaa
agtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtggtta
gctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgatgca
acttacaatgaaattgtcacaattgaacgtctaagatcggttaatcccaacaaacctgcc
acaaaagatactttccataagatcaagctggatgtgccagaagacttacgacaaatgtgt
gctaaagagtcggctcacaaggactttaaaaaggcagttggtgccttttctgtaacttat
gatccagaaaattatcagcttgtcattttgtccatcagtgaagtcacctcaaagcgagca
catatgctgattgacatgcactttcggagtctgcgcactaagttgtctctgatactgaga
aatgaagaagctagtaagcagctggagagttcaaggcagcttgcctcgaggtttcatgaa
cagtttatcgtaagagaagatctgatgggtctagctattggtactcatggtgctaatatt
cagcaagctagaaaagtacctggggtcactgctattgatctagatgaagatacctgcaca
tttcatatttatggagaggatcaggatgcagtgaaaaaagctagaagctttctcgaattt
gctgaagatgtcatacaagttccaagaaacttagtaggcaaagtgataggaaaaaatgga
aaactgattcaagagattgtggacaagtcaggagttgtgagggtgaggattgaggctgaa
aatgagaaaaatgttcctcaagaagaggaaattataccaccaaattcccttccttccaat
aattcaaggatcggacctaatgccccggaagaaaaaaaacatttagatataaaggaaaac
agcacccatttttctcaacctaacagtacaaaagttcagaggggtatggtaccatttgtt
tttgtgggaacaaaggacagcatcgctaatgccactgttcttttggattatcacctgaac
tatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcagttgcga
cagattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggctatgtg
actgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaatagggggcacggc
agacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttctgaaaca
gaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaagagagg
gagagcttcctgcgcagaggagacggacggcggcgtggagggggaggaagaggacaagga
ggaagaggacgtggaggaggcttcaaaggaaacgacgatcactcccgaacagataatcgt
ccacgtaatccaagagaggctaaaggaagaacaacggatggatcccttcagatcagagtt
gactgcaataatgaaaggagtgtccacactaaaacattacagaatacctccagtgaaggt
aatcggctgcgcacgggtaaagatcgtaaccagaagaaggaaaagccagacagcgtggat
ggtcagcaaccactcgtgaatggagtaccctaa
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integrated database retrieval system
