Callithrix jacchus (white-tufted-ear marmoset): 100414895
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Entry
100414895 CDS
T03264
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100414895 (VPS50)
Membrane trafficking [BR:
cjc04131
]
Protein recycling
Others
EARP complex
100414895 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
100414895
NCBI-ProteinID:
XP_002751648
Ensembl:
ENSCJAG00000013774
UniProt:
F7DIS6
LinkDB
All DBs
Position
8:complement(53529826..53672307)
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHGNEDTASASEG
SNMIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKAVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKCAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVLLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatcgctcatgacccgacagggtctgaaaagccctcaagaaagcctc
agtgatcttggtgccatagagagtctccgggtccctggaaaggaagaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagcttattaatagtattgaacaagtg
tatttttctgcggattcatttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatttgcaagaattagaagagtacagagacaaattgaaacaacagcaagctgcagta
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggtcttcagttagctgctgttatctgtacaaatgggaga
agacacttgaatattgcaaaagaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacgcttaagtgaaatgctggaggaggaagactatccgggagctatt
caattgtgccttgaatgtcagaaagctgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagatactttggaacagattgaggaacagttggacgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
agacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaacactgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gacacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgcagacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatggcaatgaggatacggcttccgcttcagaaggg
agtaacatgataggtactgaagaaactaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacgtacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaggagtct
attagaaaacaaagtgtcaattacttcaagaattaccatagaacacggcttgatgaactg
agaatgttcctagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aaacagccggtctcaacttcttcaaaagcggtgaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggctaaccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagtgtgcctatcaagagtatgacagtgac
agtgatgttcctgaggaactcaaacgagactatgtggatgagcagacaggagatgctcct
gtgaaaagtgtttctcgagaaactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacctattttaacaaatacaaccttgaatgtaataagacttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttattcatttcatgtct
caactatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactcggccttagtagtagtagactaagaacaacgctaaacagaatacag
gaaagccttattgatctagaagtttcagctgatcctactgccacgctcacagcagcagaa
gaaagaaaggagaaggtgccaagtccacacctcagtcacttagtgcttttgacatctggg
gatacactgtatgggttggcagaaagagtggtagccacggaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaagccc
tttcttcagcagttttattctcagacagtctcaactgccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactgtta
aaggaatttgagcagtttaacaggaggctaaatgaagtttctaagagagttcgaataccc
ttgcctgtgtctaatatactttgggaacactgtatacgattggctaatagaactattgta
gaaggatatgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacttatatcaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacaaagcagctgaccaatctggtgaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctagcagctatagatgatatagac
agacctaaaagataa
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