Callithrix jacchus (white-tufted-ear marmoset): 100415206
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Entry
100415206 CDS
T03264
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100415206 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100415206 (U2AF1)
Spliceosome [BR:
cjc03041
]
Complex A
U2 snRNP components
U2 related factors
100415206 (U2AF1)
Complex B
100415206 (U2AF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
100415206
NCBI-ProteinID:
XP_008985001
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All DBs
Position
21:complement(47057438..47073169)
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AA seq
240 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccattttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcatgtcgtcatggagacaggtgctctcggttgcacaataaacca
acgtttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgccgtgagcgatgttgagatgcaggaacactatgatgaa
ttttttgaggaggtttttacagagatggaggagaagtatggggaagttgaggagatgaac
gtctgtgataacctgggcgaccacctggtggggaacgtgtacgtcaagtttcgccgtgag
gaagatgcggagaaggctgtgattgacttgaataaccgctggtttaatggacagccgatc
cacgccgagctgtcgcccgtgacggacttcagagaagcctgctgccgtcagtatgagatg
ggggaatgcacgcgaggcggtttctgcaacttcatgcatctgaagcccatttccagagag
ctgcggcgggagctgtatgggcgccgtcgcaagaagcatagatcaagatcccgatcccgt
gagcgtcgttcccggtctagagaccgcggtcgtggcggtggcggtggcggcggtggaggc
ggcggcggacgggagcgtgacaggaggcggtcgagagatcgtgaaagatctgggcgattc
tga
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