Callithrix jacchus (white-tufted-ear marmoset): 100415417
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Entry
100415417 CDS
T03264
Symbol
LMX1B
Name
(RefSeq) LIM homeobox transcription factor 1-beta isoform X3
KO
K09371
LIM homeobox transcription factor 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100415417 (LMX1B)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100415417 (LMX1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dppa2_A
HTH_32
Motif
Other DBs
NCBI-GeneID:
100415417
NCBI-ProteinID:
XP_035113661
Ensembl:
ENSCJAG00000007071
LinkDB
All DBs
Position
1:172267340..172354771
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AA seq
402 aa
AA seq
DB search
MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQ
RPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCME
KIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVS
PDESDSGRVVSPTVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRA
FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRL
GQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGNDSIFHDID
SDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcaacaggtcccgagtcgctggagaggtgcttccctcgcgggcagactgac
tgcgccaagatgttggacggcatcaagatggaggagcacgccctgcgccccggacccgcc
actctgggggtgctgctgggctccgactgcccgcatcccgccgtctgtgagggctgccag
cggcccatctccgaccgcttcctgatgcgagtcaacgagtcgtcctggcacgaggagtgt
ttgcagtgcgcggcgtgtcagcaagccctcaccaccagctgctacttccgggatcggaaa
ctgtactgcaaacaagactaccaacagctcttcgcggccaagtgcagcggctgcatggag
aagatcgcccccaccgagttcgtgatgcgggcgctggagtgcgtgtaccacctgggctgc
ttctgctgctgcgtttgtgagcggcagctacgcaagggcgacgagttcgtgctcaaggag
ggccagctgctgtgcaagggtgactacgagaaggagaaggacctgctcagctccgtgagc
cccgacgagtccgactctggccgggttgtgtcccccacagtgaagagcgaggacgaagat
ggggacatgaagccggccaaggggcagggcagccagagcaagggcagcggggatgacggg
aaggacccaaggaggcccaagcgaccccggaccatcctcactacacagcagcgaagagcc
ttcaaggcctcctttgaggtctcatccaagccctgccgaaaggtccgagagacactggca
gctgagacgggcctcagtgtgcgtgtggtccaggtctggtttcagaaccaaagagcaaag
atgaagaagctggctcggcggcaccagcagcagcaggagcagcagaattcccagcggctg
ggccaggaggtcctgtccagccgcatggagggcatgatggcctcctacacgccgctggcc
ccgccacagcagcagatcgtggccatggagcagagcccctatggcagcagcgaccccttc
cagcagggcctcacgccaccccaaatgccagggaatgactccatcttccacgacatcgac
agcgatacctccttaaccagcctcagtgactgcttccttggctcctcagatgttggctcc
ctgcaggcccgtgtggggaaccccatcgaccggctctactccatgcagagttcctacttc
gcctcctga
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