KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100415512
Entry
100415512         CDS       T03264                                 
Symbol
H2AFX
Name
(RefSeq) histone H2AX
  KO
K11251  histone H2A
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082  ATP-dependent chromatin remodeling
cjc04217  Necroptosis
cjc04613  Neutrophil extracellular trap formation
cjc05034  Alcoholism
cjc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100415512 (H2AFX)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100415512 (H2AFX)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100415512 (H2AFX)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100415512 (H2AFX)
  09165 Substance dependence
   05034 Alcoholism
    100415512 (H2AFX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100415512 (H2AFX)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100415512 (H2AFX)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100415512 (H2AFX)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100415512 (H2AFX)
SSDB
Motif
Pfam: Histone_H2A_C Histone Histone_ABTB CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 100415512
NCBI-ProteinID: XP_035120715
UniProt: U3CDD7
LinkDB
Position
11:complement(16534767..16537653)
AA seq 143 aa
MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
TSATVGPKAPSGGKKATQASQEY
NT seq 432 nt   +upstreamnt  +downstreamnt
atgtcgggccgcggcaagactggcggcaaggcccgcgccaaagccaagtcgcgctcgtcg
cgcgccggcctccagttccccgtgggccgcgtacaccggctgctgcggaagggccactac
gccgagcgcgttggcgccggcgctccagtgtacctggcggcagtgctggagtacctcacc
gctgagatcctggagctggcgggcaatgcggcccgcgacaacaagaagacgcggatcatc
ccccgccacctgcagctggccattcgcaacgacgaggagctcaacaaactgctgggcggc
gtaactatcgcccagggaggcgttctgcccaacatccaggccgtgctgctgcccaagaag
accagcgccaccgtggggccgaaggcgccctcaggcggcaagaaggccacccaggcctcc
caggagtactaa

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