Callithrix jacchus (white-tufted-ear marmoset): 100894237
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Entry
100894237 CDS
T03264
Name
(RefSeq) protocadherin beta-16 isoform X1
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100894237
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100894237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100894237
NCBI-ProteinID:
XP_054105873
UniProt:
A0A5F4WI83
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All DBs
Position
2:37648549..37661197
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AA seq
776 aa
AA seq
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METGWMHNRRHRQVLVFFVLLSLSGAGAELGPYSTVEETERGSFVANLGKDLGLGLTEMS
SRGARIISQGNKQHLQLKVQTGDLLINEKLDREELCGPIEPCILHFQVLMEKPLEIFQAE
LRVIDINDHSPVFNKKEMVLKILENSPLGTEFPLYHAVDMDIGSNNVQNYKISPSSYFRV
LTRERNDGRKYPELVLDKELDREEEHQLRLTLTALDGGSPPRSGTTQVRIEVVDINDNAP
EFEQPIYKVQIPENSPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLELNPRTGE
IRLREQLDFETTMSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS
PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREAKPEYNIT
VTVTDMGTPRLQTEYNVTVQISDVNDNAPTFTQSSYTLFVRENNSPALHIGSVSATDRDS
GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPRSATATLHV
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
SVGGCSVPEGPFPGHLMDVSGTGTLSQSYQYEVYLTGGSGTNEFKFLKPIIPNFSS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggagactggatggatgcacaatcggagacacaggcaagtccttgttttctttgttttg
ctgagcttgtctggggcgggcgccgagttggggccctattccactgtggaagaaaccgag
agaggctcttttgtggcaaacctagggaaagacctgggtttggggttgacagagatgtcc
agccgcggggccaggatcatttcccaggggaacaaacagcatttgcagctcaaggttcaa
actggagatttgctcataaatgagaagctagatcgagaggagctatgcggtcccattgag
ccttgtatactacatttccaagtgttaatggaaaaacccttagaaatatttcaggctgaa
ctgagggtgatagatataaatgaccattctcccgtgttcaataagaaggaaatggttcta
aaaatactggaaaacagtcctctaggaactgagttccccctgtatcatgctgtggacatg
gacataggaagtaataacgttcaaaactataaaatcagcccaagctcctatttccgggtt
ctaaccagagaacgcaatgatggcaggaaatatcctgagctagtgttggataaagagctg
gatcgggaggaggagcatcaactgagattaaccctgacagcgctggatgggggttctccg
ccgcgatctggaaccacccaggtccgcattgaagtggtggacatcaatgataacgcacct
gagtttgagcagcccatctacaaagtgcagattccagagaacagcccccttggctccctg
gttgccacagtctccgccagggatttagacagcggagccaatgggaaaatatcatacaca
ctctttcagccttcggaggatatcagtaagactttggaattaaatcctaggaccggagaa
attcgactgagagaacaattggattttgaaacgactatgtcttatgaagtagacatcaag
gccacagatgggggaggtctttcaggaaagtgtactcttctcctgcaggtggtggacgtg
aacgacaatcctccacaggtgaccatgtctgcactcaccagccccatcccagagaactcg
cctgagattgtagttgctgttttcagcgtttcagatcccgactccgggaacaatgggaag
acgatttcctccatccaggaagaccttccctttcttctaaaaccctcagtcaagaacttt
tacaccttggtaacggagagagcactcgacagagaagcaaaacctgaatataacatcacc
gtcacagtcacagatatggggactccaaggctgcaaacggagtacaacgtaacagtgcag
atatcggatgtcaatgacaacgcccccaccttcacacaatcctcctacaccctgtttgtt
cgggagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacagagactca
ggcaccaacgcacaggtcacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctccctggtctccatcaacgcggacaacggacacctgttcgccctccggtccctggac
tacgaggccctgcaggcgttcgagttccgcgtgggcgccacagatcgcggctccccggcg
ctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacaggctg
ctggtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcacgtg
ctcctggtggacggcttctcccagccctacctgccgctcccggaggcggccccggcccag
gcccaggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctc
ttcctgttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcc
tctgtgggtggctgctcggtgcccgagggcccgtttccagggcatctgatggacgtgagc
ggcaccgggaccctgtcccagagctaccagtacgaggtgtatctgacaggaggttctggg
acaaacgagttcaaattcctgaagccgattatccccaacttctcgtcttag
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