Callithrix jacchus (white-tufted-ear marmoset): 100896693
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Entry
100896693 CDS
T03264
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1 isoform X1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04022
cGMP-PKG signaling pathway
cjc04024
cAMP signaling pathway
cjc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100896693 (CNGA1)
04022 cGMP-PKG signaling pathway
100896693 (CNGA1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
100896693 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100896693 (CNGA1)
Ion channels [BR:
cjc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100896693 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
Tim54
NPR3
Zip
Sec62
SLC52_ribofla_tr
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
100896693
NCBI-ProteinID:
XP_017826067
Ensembl:
ENSCJAG00000018878
UniProt:
F7I8Y1
LinkDB
All DBs
Position
3:142019908..142049679
Genome browser
AA seq
690 aa
AA seq
DB search
MKLTMKKNIINTQLSFVNMPNVIVPDIEKEIRRMENGACSSFSDDDDSASICEESENENP
HTRGSSSYKLHRKGGPSQREQYLPGAIALFNVNNSSNKDQEPEGKKKKKKEKKSKSGDKN
ENTKDPEKKKKKKDTEKKKKEEKSKDKKEEEKKEVVIIDPSGNTYYNWLFCITLPVMYNW
TMVIARACFDELQSDYLEYWIVLDYVSDIVYLMDMFVRTRTGYLEQGLLVREELKLINKY
KSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRI
SNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTL
TTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQY
MHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIF
ADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSD
GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGR
QILMKDGLLDLNIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLT
KVEKFLKPLIDTEFSSIEGPGADSAPIDST
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaccatgaagaaaaatattatcaatacgcagctgtcctttgtaaacatgccc
aatgtgattgtaccagatattgaaaaggaaatacgaaggatggaaaatggagcatgcagc
tccttttctgatgatgatgacagtgcctctatatgtgaagaatcggagaatgaaaaccct
catacaaggggttcctctagttataagttacacagaaagggaggaccgtcacagagggag
cagtacctacctggtgctattgcacttttcaatgtgaacaacagcagcaataaggaccaa
gaaccagaaggaaaaaagaaaaagaaaaaagaaaagaagagcaagtcaggtgataaaaat
gaaaacacaaaggacccagagaagaaaaagaagaaaaaggacacagagaaaaagaagaaa
gaggagaaaagcaaagataagaaagaagaggagaagaaagaggttgtgattattgatccc
tcgggaaacacatattataactggctgttttgcatcaccttacctgtaatgtacaactgg
acaatggttattgcaagagcatgttttgatgagcttcaatctgattacctagaatattgg
attgttttggattacgtatcagacatagtctatttgatggatatgtttgtacgaacaaga
acaggttacctagaacaaggactgctggtaagggaagaacttaaactcataaataaatat
aaatccaacttgcaatttaaacttgatgttctgtcactgataccaactgatttgctgtat
tttaagttagggtggaactatccagaaattagattaaacaggctcttaaggatctctcgt
atgtttgagttcttccagagaacagaaacaaggacaaattatccaaacatctttaggatt
tccaaccttgttatgtatatcgtcatcattatccactggaatgcatgtgtgttctactct
atttctaaagctattggatttggaaatgatacatgggtctaccctgatattaatgatcct
gaatttggccgtttggctagaaaatatgtgtacagcctctactggtctacactgactttg
acgaccattggtgaaacaccccctcctgtgagggattctgagtatgtctttgtggtggtt
gatttcctaattggagtgttaatttttgctaccattgttggtaacataggttctatgatt
tccaacatgaatgcagccagagcagaatttcaagcaagaattgatgctatcaagcaatat
atgcattttcgaaatgtaagcaaagatatggaaaagagggttattaaatggtttgactac
ctctggaccaacaaaaaaacagttgatgagaaagaagtcttaaagtatctacctgataaa
ctgagagcagaaattgccatcaacgttcacttagacacattaaaaaaggtgcgcattttt
gctgattgtgaagctggtctgttggtggagttggtcttgaaattgcaaccccaagtctac
agtcctggagattacatttgcaagaaaggggatatcggacgagagatgtacattatcaag
gaaggcaaactcgctgtggtggcagatgatggagtcactcagtttgtggtattgagtgat
ggcagctacttcggtgagatcagcattcttaacattaaaggaagcaaagctggcaatcga
agaacggccaatattaaaagtattggctactctgaccttttctgtctctcaaaagatgac
ctcatggaagctctaactgagtacccagatgccaaaacgatgctggaagagaaggggagg
cagattctgatgaaagatggtctactggatctaaacattgcaaatgctggcagtgatccg
aaagatcttgaagagaaggttactcgaatggaggggtcagtagacctcctgcaaacaagg
tttgcccgaattttggctgagtatgagtccatgcagcagaaactgaaacaaagattaacc
aaggttgagaaatttctgaaaccgcttattgacacagaattttcaagtattgagggacct
ggagcagacagtgcacccatcgactctacatag
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