Callithrix jacchus (white-tufted-ear marmoset): 103789493
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Entry
103789493 CDS
T03264
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X6
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103789493
03015 mRNA surveillance pathway
103789493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
103789493
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103789493
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103789493
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103789493
NCBI-ProteinID:
XP_035138105
LinkDB
All DBs
Position
20:complement(28212188..28256934)
Genome browser
AA seq
480 aa
AA seq
DB search
MLSRGGRGCRQCPITLPVGDLSNLHLKEEKIKPDANGAVVKPSANAEKTDEEEKEDRAAQ
SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQ
ENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTG
KVIEQMGKFYPALKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVF
VLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKR
EEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtcgcggtggccggggctgcaggcagtgtcccatcaccctgcctgtgggcgat
ttgagcaacttgcatcttaaggaagagaaaatcaaaccagatgccaatggtgctgttgtc
aagcccagtgccaacgcagagaagacagatgaagaagagaaagaggacagagctgcccag
tccttactcaacaagctgatcagaagcaaccttgtcgataacacaaaccaagtggaagtc
ctacagcgggatccaaactccccactgtactcggtgaagtcttttgaagagcttcggctg
aaaccacagcttctccaaggagtctatgccatgggtttcaatcgtccatccaagatacaa
gagaacgcattgccactgatgctcgctgagcccccacagaacttaattgcccaatctcag
tctggtactggcaaaacagctgcctttgtgctggccatgcttagccaagtagaacctgca
aacaaatacccccagtgtctatgcctctccccaacatacgagcttgccctccaaacagga
aaagtgattgaacaaatgggcaaattttaccctgcactgaagctagcttatgctgttcga
ggcaataaattggaaagaggccagaagatcagtgagcagattgtcattggtacccctggg
accgtgctggactggtgctccaagctcaagttcattgatcccaagaaaatcaaggtgttt
gttctggatgaggctgacgtcatgatagccactcagggccaccaggatcagagcatccgc
atccagaggatgctgcccaggaactgccagatgctgcttttctccgccacctttgaagac
tctgtgtggaagtttgcccagaaagtggtcccagacccaaacgttatcaaactgaagcgc
gaggaagagaccctggacaccatcaaacagtactatgtcctgtgcagcagcagagacgag
aagttccaggccctgtgtaacctctacggggccatcaccattgctcaagccatgatcttc
tgccatactcgcaaaacagctagctggctggcagcagagctctcaaaagaaggccaccag
gtggctctgctgagtggggagatgatggtggagcagagggctgcggtgattgagcgcttc
cgagagggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgcgggatcgatgtt
gaacaagtgtctgtcgttatcaactttgatcttcctgtggacaaggacgggaaccctgac
aacgagacctacctacaccggatcgggcgcacgggccgctttggcaagaggggcctggca
gtgaacatggtggacagcaagcacagcatgaacattctgaacagaatccaggagcatttt
aataagaagatagaaagattggacacggatgatttggacgagatcgagaaaatagccaac
tga
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