Callithrix jacchus (white-tufted-ear marmoset): 103790736
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Entry
103790736 CDS
T03264
Name
(RefSeq) nuclear RNA export factor 2
KO
K14284
nuclear RNA export factor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
cjc05014
Amyotrophic lateral sclerosis
cjc05164
Influenza A
cjc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103790736
03015 mRNA surveillance pathway
103790736
03008 Ribosome biogenesis in eukaryotes
103790736
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103790736
05168 Herpes simplex virus 1 infection
103790736
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103790736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
103790736
03009 Ribosome biogenesis [BR:
cjc03009
]
103790736
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103790736
mRNA cycle factors
Stress granule specific factors
103790736
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103790736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
103790736
NCBI-ProteinID:
XP_035144727
LinkDB
All DBs
Position
X:94969628..94979421
Genome browser
AA seq
561 aa
AA seq
DB search
MGDVHKDRQLRHTPYNIERSRKLVKWHSEDQIYTTTWRNRKLPERKMMEDTRDGKTRAWF
KVTIPYGGKYDKAWLMNSIQSHCSVPFTPLDFHYFQNRAHFFVQGAGTASALKDVNYTIC
DDQNRKICIFVNQSTAPYSVKNKLKPSQMQLLKLTMDKRYDVSKQALDLQSLRFDPDMTG
HDIDIILNRRNCMAATLKVIESNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSR
NELKSVWELGKVKGLKLEELWLEGNPLCSTFSDESAYVSAIQNCFPKLLRLDGRELAPAM
NVDTDSSELMKPCKESCNGSETLKHTVLQFLQQYYSIYDSGDRRGLLGAYHEEACFSTTI
PFNPEDSAPKSLSQYFEDSRNIKTLKDPYLREELLKHTKRDIVDFLSTLPKTEHDLSSIL
VDMWYQTKWMLCFSVNGVFKEVEGQSQGSVLAFTRTFIVTPGSSSSLCIVNDELFVRDAS
HQETQSAFSIPVSTPSSSSELSLSQERQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAG
QIFTVLQTKGKIPAEAFKQIP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtccacaaggaccgccaactaagacacactccttataacatcgaacgcagc
aggaagctagtgaaatggcatagtgaagatcaaatctatactaccacgtggagaaacaga
aaacttccagagagaaaaatgatggaggacacgcgagatggaaaaacgagggcctggttc
aaggtcacaattccttatgggggaaagtatgacaaggcgtggctaatgaattcaatccag
agccattgcagtgtccccttcactccactcgatttccactacttccaaaatcgggcacac
ttctttgtgcaaggtgctggtactgcctccgctttgaaggatgtcaactatacgatttgt
gatgaccagaaccggaagatatgtatatttgtcaatcagtctactgcaccctactctgtg
aagaataagttgaagccaagccaaatgcagttgctaaagctgaccatggacaaacgatat
gatgtctccaagcaagctcttgatctccaaagtctccgctttgacccagacatgacgggc
catgatattgatataatcctgaatcgaagaaactgcatggctgccaccctgaaggtcatt
gaatcgaatttccctgagctactgtctttgaacttgtgcaacaacaaactgtaccagctg
gatggcctgtctgacattacagagaaggcccccaaagtcaagaccctgaacctctccaga
aatgagctgaagtcggtgtgggagttgggcaaggtgaaagggctgaagctcgaagagctg
tggctagaagggaaccccttatgcagcaccttctctgacgagtctgcctacgtaagtgcc
atccagaattgtttccccaagttgttacgcctggacggccgagagttagccccagcaatg
aatgttgacaccgacagctctgagttaatgaaaccctgcaaggaaagctgtaatggatct
gagaccctaaagcatacagtcctgcagttcctgcagcaatattactcaatctatgactct
ggagatcgacggggtctccttggtgcttaccatgaggaggcctgcttctccacgactatt
cccttcaaccccgaggactcagccccgaagagcttgagccagtacttcgaggatagcagg
aatataaaaacactcaaggacccctacctgagggaggaactgctgaagcacacaaaacgt
gacattgtggacttcctcagcacgttgcccaagactgagcatgacctcagctccatcctg
gtggacatgtggtaccagacaaagtggatgctctgcttttctgtcaacggggtgttcaag
gaagtggaaggacagtctcagggttctgttctcgccttcacccggaccttcatcgttacc
cccggtagcagttccagtctgtgcatcgtgaatgacgagctatttgtgagggacgccagc
caccaagagactcagagtgccttctccatcccagtgtccacaccctcctccagctctgag
ctctccctctcccaggagcggcaggaaatggtgcaggctttctctgcccagtctgggatg
aagctggaatggtctcagaagtgccttcaggacaatgagtggaactacaccagagctggt
cagatcttcactgtgctccagaccaagggcaagatcccagcggaggccttcaagcagatc
ccctga
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