Callithrix jacchus (white-tufted-ear marmoset): 103791587
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Entry
103791587 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103791587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
103791587
03041 Spliceosome [BR:
cjc03041
]
103791587
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103791587
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103791587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
CLPTM1
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
103791587
NCBI-ProteinID:
XP_035147401
LinkDB
All DBs
Position
2:complement(141397410..141414322)
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AA seq
612 aa
AA seq
DB search
MKSGGGKDVAIEIEEQRIQSCVHFMTLRKLNRLAHIRLKKGRDQTHEAKQKVNVYHLQFQ
NLLYEVMHLQKEITKCLEFKSKHEEIYRVSLEEFYKEAPQDISKAEVTVGDPHQQTLARL
DWELEQCERLSEEYRECLSNKEKILKEIEVKKEYLSSLQLCLNSIMQASLPVQEDLFMPF
DQAHKQYETARYLPPPFYVLSVQATAYGQVCDKTLSVAIEGRVDKAKALFKPPEDSQDDE
SDSDAEEEQTTKHWRPTLGIQLDDKHKEMQTSHPPSVMLDLKCKDDSVLHLTFFYLMNLN
IMTVKAKVTTAMELIIPISAGDLLSPDLVLSCLYPGDHGKKPPNPANQCQFDKVGILTLS
NYVLELGHSYLWVQKLDGLHFPKEQCQQTVISGHSLSASHMETTMKLQKNRVQSHLALHK
QFLSLEHGIVPVTSDCQYLFPAKVVSRLVKWMTVSHEDYMELHFTKDIVDMGLAGGTNLY
YMAVIKRSRATLQAAVVLYPGYFSIPHIFQLCLNWKGEKTNSNXDNIQAMESEVNVCCKE
LCGPWPSHQLLTNHLQQLCVLLDVYLETENHDDSVEGPKELPQEKMCLQLFRDPGRMKPF
KYNHPQGFFSHR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgggggtggcaaggatgtggcaattgaaatagaagaacagaggatccagagc
tgtgtgcatttcatgactttgagaaagcttaaccgattagcccacatcaggttgaagaaa
ggaagagatcagacccatgaggctaagcagaaagtaaatgtctatcacctgcagttccag
aacctgttgtatgaggtgatgcacctacagaaggagatcaccaaatgtttggagtttaag
tcaaagcatgaagaaatttatcgggtaagtttagaggagttttataaggaggctccacaa
gatatcagcaaggctgaagtcaccgtgggagaccctcaccagcaaacacttgcacgtctg
gactgggagctggagcagtgtgaaaggctgtcagaggagtaccgtgaatgcctatccaac
aaggagaagatcctcaaggaaattgaggtgaagaaggagtacctgagcagtctccagctg
tgcctcaacagcatcatgcaggcttcccttccagtgcaggaggacctgtttatgccattt
gaccaggctcacaagcagtatgagacagccaggtacctgccgcctcccttctatgtcctt
tctgttcaggccactgcatatgggcaggtctgtgataagacattatctgtggcaattgaa
ggaagagtggacaaagccaaggctctgtttaagcctccagaggactcccaagatgacgag
agtgactcggatgctgaggaggagcagaccacgaaacactggagacccacgctggggatt
cagctggatgacaaacacaaggagatgcagacgagtcacccaccatccgtcatgcttgac
ctgaagtgcaaagatgacagtgtgcttcacctgactttcttctacctcatgaacctcaat
atcatgacagtaaaagccaaagtgacaactgccatggagctgatcatccccatcagtgca
ggtgacttgctgtctcctgacttagtcctgagttgcttgtatcctggggatcatggaaaa
aaacctccaaatccagccaatcagtgtcagtttgataaagttggcatcctgactttgagc
aactatgtacttgagttaggtcactcctatttatgggtacagaagctggatggcctccac
tttcccaaagagcagtgccagcaaacagtgatttctggccactcactgagtgccagccac
atggagaccaccatgaaacttcagaagaacagggtgcagtcccacctggccctccacaaa
cagtttttatccctagaacatggcattgtgccagttaccagtgattgccagtacctcttc
cctgccaaggttgtctctcgcctggtgaagtggatgacagtttctcatgaggattacatg
gagctgcatttcactaaagacattgtggatatggggctggctgggggcaccaatctctac
tacatggcagtcatcaaaaggagcagagccacactgcaggctgctgtggtgttgtaccct
ggctacttctccatcccacatatttttcagctctgtttgaactggaaaggggagaaaaca
aacagcaatngagacaacattcaggccatggagagcgaagtcaatgtttgctgcaaggag
ctgtgtggcccttggcccagccaccagctgttgactaaccatctgcagcagctgtgtgtg
ctgctggatgtttatctggagaccgagaaccatgacgacagtgtggaaggaccgaaggaa
ctgccccaggagaagatgtgtctgcagctcttcagggatcctggcaggatgaagccgttt
aaatacaaccatcctcagggattcttcagccatcgctga
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