KEGG   Callithrix jacchus (white-tufted-ear marmoset): 103793878
Entry
103793878         CDS       T03264                                 
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03030  DNA replication
cjc03410  Base excision repair
cjc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103793878
   03410 Base excision repair
    103793878
   03450 Non-homologous end-joining
    103793878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjc03032]
    103793878
   03400 DNA repair and recombination proteins [BR:cjc03400]
    103793878
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    103793878
DNA replication proteins [BR:cjc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    103793878
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     103793878
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     103793878
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103793878
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XPG_I_2 5_3_exonuc_N HHH_5
Other DBs
NCBI-GeneID: 103793878
NCBI-ProteinID: XP_008997391
LinkDB
Position
1
AA seq 380 aa
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGKT
TSHLMGMFYRTIHMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAK
QEVEKFTKRLVKVNKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASESKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKKAHQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEEXIRSGVKRLSKSRQGSTQGRLDDFFKVTSSLSSAKRKEPEP
KGSTKKKAKTGAAGKFKRGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcaaggcctggccaaactaattgctgacgtggcccccagtgccatccgggag
aatgacatcaagagctactttggccgtaaggtggccattgatgcctctatgagcatttat
cagttcctgattgctgttcgccagggtggggatgtgctgcagaacgaggagggtaagacc
accagccacctgatgggcatgttttaccgcactatccacatgatggagaacggcatcaag
cccgtgtatgtctttgacgggaagccaccacagctcaagtcaggcgagctggccaaacgc
agtgaacggcgggctgaggcagagaagcagctgcagcaggctcaggctgctggggccaag
caggaggtggaaaaattcactaagcggctggtgaaggtcaataagcagcacaacgatgag
tgcaagcatctgctgagcctcatgggcatcccttatctcgatgcacccagcgaggcagag
gccagctgtgctgccctggtgaaggctggcaaggtctatgctgcggctaccgaggacatg
gactgcctcacctttggcagccctgtgctaatgcgacacctgactgccagtgaatccaaa
aagctgcccatccaggaattccacttgagccggattctgcaggagctgggcctgaaccag
gaacagtttgtggatctgtgcatcttgctgggcagtgactactgtgagagtatccggggc
attgggcccaagcgggctgtggacctcatccagaagcacaagagcattgaggagatagtg
cggcgacttgaccccaacaagtaccctgtgccagaaaattggctccacaagaaggctcac
cagctcttcttggaacctgaggtgctggacccagagtctgtggagctgaagtggagcgag
ccaaatgaagaagagctggtcaagttcatgtgtggcgaaaagcagttctctgaggagtga
atccgcagcggggtcaagaggctgagcaagagccgccaaggcagcacgcagggccgcctg
gatgatttcttcaaggtgacgagctcgctctcttcagctaagcgcaaggagccagaaccc
aagggatctactaagaagaaggcaaaaactggggcagcagggaagtttaaaaggggaaaa
taa

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