Callithrix jacchus (white-tufted-ear marmoset): 103796241
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Entry
103796241 CDS
T03264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103796241
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103796241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
103796241
03041 Spliceosome [BR:
cjc03041
]
103796241
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103796241
mRNA cycle factors
Common to processing body (P body) and stress granule
103796241
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
hnRNP proteins
103796241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103796241
NCBI-ProteinID:
XP_054095380
LinkDB
All DBs
Position
1:191959913..191978570
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKHSRGFGFV
SYAPVEEVDAAMNARPHKVDGRVVEPMRAISREDSQRPGAHLTVKKMFVGGIKEGTEERH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDNHDSVDKIVIQKYHTVNGHNYGVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDDGYGGGGPGYSGGSRGFGSGGQGYGNQGSGYGRSGSCDSYNNGGEGSFGG
GSGGNFRGGGSYNDFGSYNNQSSNFGPIKGGNFGGSSSGPYVVAANTLPNHETKVAMAVP
VAAVAMAVAEDFN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcctaaagagccagaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaaccaatgagagcctgaggagccattttgagcaatggggaacgctc
acagactgtgtggtaatgagagatccaaacaccaagcactccaggggctttgggttcgtc
tcgtatgcacctgtggaggaggtggatgcagctatgaacgcaaggccacacaaagtagat
ggaagagttgtggaaccaatgagagctatctcaagagaagattctcaaagaccaggtgcc
cacttaactgtgaaaaaaatgtttgttggtggcattaaagaaggcactgaagaacgtcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgactgacaga
ggcagtggcaagaaaaggggctttgcttttgtaacctttgacaaccatgactccgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactatggagttaggaaagcc
ctgtcaaagcaagagatggccagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatgatggttatggaggaggtgggcctggttac
tctggaggaagcagaggctttggaagtggtggacagggttatggaaaccagggcagtggc
tatggcaggagtggcagctgtgacagctataacaacggaggcgaaggcagctttggcggt
ggtagtggaggcaattttagaggtggtggaagctacaatgattttggcagttacaacaat
cagtcttcaaattttggacccataaagggaggaaactttggaggcagcagctctggcccc
tatgtggtggcagccaatactttgccaaaccacgaaaccaaggtggctatggcggttcca
gtagcagcagtagctatggcagtggcagaagattttaattag
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