Callithrix jacchus (white-tufted-ear marmoset): 108587751
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Entry
108587751 CDS
T03264
Symbol
SREBF2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
108587751 (SREBF2)
04131 Membrane trafficking [BR:
cjc04131
]
108587751 (SREBF2)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108587751 (SREBF2)
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108587751 (SREBF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
DUF6426
Motif
Other DBs
NCBI-GeneID:
108587751
NCBI-ProteinID:
XP_017824731
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All DBs
Position
1:complement(186961580..187036629)
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AA seq
1251 aa
AA seq
DB search
MTRHHPTRRLARPLAEMSLVPLTTNKGARGLGAWPQGARAGAGESRPALSARRQGATQTW
RPLASAGEAIPDGGCRVSWAVATAPPPRLPERDGRGASALSRAMDESGELGGLETMETLT
ELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQLCSSFPGSGGNGGSSGGSSGGGGGGGGG
GSSSNGRGSSGGAVDPAMPRSFSQVPLPSFSPSAASPQAPALQVKVSPTSVSTTPRATPI
LQPRPQPQPQPQAQLQQQTVMITPTFSTTPQTRIIQQPLIYQNAATSFQVLQPQVQSLVT
SSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQTVAAPQVQQVPVLVQPQIIKT
DSLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSNGTILTTMPVMMGQEK
VPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVL
RKAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDSEVDLKIEDFNQNVLL
MSPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFL
CLSFNPLTSLLQWGGAHDSDQHPNSGSGRSVLSFESGSGGWFDWMMPTLLLWLVNGVIVL
SVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLSRGDFAAAAANLQTCLAVLGRALPT
SRLDLACSLSWNVIRYSLQKLRLVRWLLRKVFQRRRATPATEAGFEDQAKTSARDAALAY
HRLHQLHITGKLPAGSACSDVHMALCAVNLAECAEEKIPPSMLVEIHLTAAMGLKTRCGG
KLGFLASYFLSRAQSLCGPEPSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQR
NPADPIAQVHQAFCKNLLERAIESLVKPQAKKKAADQDEESCEFSSALEYLKLLHSFVDS
VGIVSPPLSSSSVLKSALGPDIICRWWTSAITVAISWLQGDDAAVRFYFTKVERVPKALE
ATESPLVKAVFHACRAMHASLSGKADGQQSSFCHCERASGHLWSSLNVSGATSDPALNHV
VQLLTCDLLLSLRTVLWQKQASASQAIGETYHASGAELAGFQRDLGSLRRLAHSFRPAYR
KVFLHEATVRLMAGASPTRTHQLLEHSLRRRTTQSSKHGEVDAWPGQRERATAILLACRH
LPLSFLSSPGQRAVLLAEAARTLEKVGDRRSCNDCQQMIVKLGGGTAIAAS
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccatcaccccacgcgccgcctcgcgcgcccattggctgagatgagcctggtc
ccattgacaacaaacaagggggcgcgcggcctgggggcgtggccgcagggggcgcgggct
ggggcgggggaatcccgccccgccctttccgcgcggcgccagggcgcaacgcaaacatgg
cggccgctggcatccgccggtgaggcgataccggacgggggttgtcgggtgtcatgggcg
gtggcgacggcaccgcccccgcgtctccctgagcgggacggcaggggggcttctgcgctg
agccgggcgatggacgagagcggcgagctgggcggtctggagaccatggagacccttacg
gagctgggcgacgagctgaccctgggggacatcgacgagatgctgcaatttgtcagtaat
caagtgggagagttccctgacctgttttcagagcagctgtgtagctcctttcctggcagt
ggtggtaatggcggtagcagtggcggcagcagcggcggcggcggcggcggcggcggcggc
ggcagcagcagcaatggcaggggcagcagcggcggagctgtggaccctgcaatgccaagg
tcattcagccaggtcccattaccttctttctcaccctcagcggcttccccacaggctcca
gccctgcaggtcaaggtctctcccacctcagtttccaccacacccagggccactcctatt
cttcagccccgcccccagccccagcctcaacctcaagctcagctgcaacaacagacggta
atgattaccccaacattcagcaccactccgcagacgaggattatccagcagcctttgata
taccagaatgcagctaccagctttcaagtccttcagcctcaagtccaaagcttggtgacg
tcctcccaggtacagccggtcaccattcagcagcaggtgcagacagtacaggcccagcgg
gtgctgacacagactgccaatggcacactgcagacccttgccccggccacagtgcagaca
gttgctgcgccacaggtgcagcaggtcccggtcctggtccagcctcagatcatcaagaca
gattcccttgttttgaccacactgaagacagatggcagccctgtcatggctgcggtccag
aacccggctctcaccgccctcaccacccctatccagacggctgcccttcaagtaccaacc
ctggtgggcagcaatgggaccattctgaccacaatgcctgtaatgatggggcaagagaaa
gtgcccattaagcaggtacctgggggagtcaagcagcttgagccccccaaagaaggagaa
aggcggacaacccacaatatcattgagaaacgatatcgctcctccatcaatgacaaaatc
atcgaattgaaagatctggtcatggggacagatgccaagatgcacaagtctggggttctg
aggaaggccattgattacatcaaatacttgcagcaggtcaatcataaactgcgccaggag
aacatggtgctgaagctggcaaatcaaaagaacaagcttctaaagggcatcgacctaggc
agtctggtggacagtgaggtggatctgaagatcgaggactttaatcagaatgtccttctg
atgtcgcccccagcctctgactcagggtcccaggctggcttctctccctactccattgac
tctgagccaggaagccctcttttggatgatgcgaaggtcaaagatgagccggactctcct
cctgtggcactgggcatggtagaccgctcacggattcttctgtgtgtcctcaccttcctg
tgcctctcctttaaccccctgacctccctgctacagtggggaggggcccacgactctgac
cagcacccaaactcaggctctggccgcagtgtcctgtcattcgagtcaggttctgggggc
tggtttgactggatgatgcctactcttctcttatggctggtaaatggtgtgattgtcctg
agcgtctttgtgaagctgctggtccatggggagccagtgatccggccacactctcgctct
tcagtcaccttctggaggcaccggaaacaggcagacctggatctctccagaggagatttt
gcagctgctgccgccaacctgcaaacctgcctggcagttttgggccgggcactgcccacc
tcccgcctggacctggcctgcagcctctcctggaacgtgatccgctacagcctgcagaag
ctacgcctggtgcgctggctgctcaggaaagttttccagcgccggcgggccacaccagcg
accgaggcaggctttgaggaccaagctaagactagtgcccgcgatgcagctctggcctat
caccggttgcaccaactgcacatcacagggaagcttcctgcaggatctgcctgttcagat
gtacacatggcattatgtgccgtaaacctggctgaatgtgcagaggagaagatcccacca
agcatgctggttgagatccacctgactgctgccatggggctcaagacccggtgtggaggc
aagctgggcttcttggcgagctacttcctcagccgagcccagagcctgtgtggccccgag
cccagcgctgttcctgactccctgcgttggctctgccaccccctgggccagaagtttttc
atggagcggagctggtctgtgaagtcagctgccaaggagagtctgtactgtgcccagagg
aacccagccgatcccattgcccaggtccaccaggccttctgcaagaatctgctggagcga
gctatagagtccttggtaaaacctcaggccaagaagaaggctgcagaccaggacgaggaa
agctgtgaattctccagtgctctggagtacctgaaattacttcattcttttgtggactct
gtggggattgtgagccccccactctccagcagctccgtgctcaaatctgccctgggtcca
gacatcatctgtcggtggtggacgtctgcaatcactgtggccatcagctggctccaggga
gatgatgcagctgtgcgcttttattttaccaaagtagaacgcgtccccaaggccctggaa
gcaacagagagccccctggtgaaggccgtcttccatgcctgcagagccatgcatgcctca
ctctctgggaaagcagatgggcagcagagttccttctgccattgcgagagggccagtggc
cacctatggagcagcctcaatgtcagcggggccacctctgaccctgccctcaaccacgtg
gtccagctacttacctgtgacctgttactgtcgctgcggacagtgctctggcaaaagcag
gccagtgccagccaggccattggggagacctaccacgcatcaggcgctgaactggcaggc
ttccagcgggacctgggcagcctgcgcaggctggcacacagcttccgcccagcgtaccgc
aaggtcttcctgcatgaagcgactgtgcgcctgatggcaggagccagtcccacccgcacc
caccagctgctggaacacagtctgcggcggcgcaccacacagagctcgaagcacggagag
gtggatgcctggcccggccagcgagagcgggccactgccatcctgctggcctgccgccac
cttcccctctcctttctatcctccccgggccagcgggcagtgctgctggccgaggctgcc
cgcaccctggagaaggtgggtgaccggcgctcctgcaatgactgccagcagatgattgtc
aagctgggtggtggcactgccattgccgcctcctga
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