Callithrix jacchus (white-tufted-ear marmoset): 108589014
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Entry
108589014 CDS
T03264
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108589014 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
108589014 (CHRNA5)
Ion channels [BR:
cjc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108589014 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
108589014
NCBI-ProteinID:
XP_054095503
Ensembl:
ENSCJAG00000010409
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All DBs
Position
10:23516188..23545427
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AA seq
469 aa
AA seq
DB search
MAARGSGSRALRLLLLLVQLVAGRCGRAGAAGGAQGGSSEPSSIAKHEDSLLKDLFQGYE
RWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYGGIK
VIRVPSDSVWTPDIVLFDNADGRFEGTSTKTVIRYNGTVTWTPPANYKSSCTIDVTFFPF
DLQNCSMKFGSWTYDGSQVDIILEDQDVDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPH
VTYSFVIKRLPLFYSLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVI
EEIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHK
LPKLLCMRSHADRYFTQKEQTESGSGPKSSRNTMEAALDSIRYITRHIVKENDVREVVED
WKFIAQVLDRMFLWTFLFVSIVGSLGLFAPVIYKWANIIIPVHIGTANK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggtcggggtcccgcgcgctccgcctgctgctgctgctggtccagctg
gtcgcagggcgctgcggtcgagcgggcgcggcgggcggcgcgcagggaggatcatctgaa
ccttcttctattgcaaaacatgaagatagtttgcttaaggatttatttcaaggctatgaa
agatgggttcgtcctgtggaacacctgaatgacaaaataaaaataaagtttggacttgca
atatctcaattggtggatgtggatgagaaaaatcagttaatgacaacaaatgtctggttg
aaacaggaatggatagatgtaaaattaagatggaaccctgaggactatggtggaataaaa
gttatacgtgttccttcagactctgtctggacacctgacatcgttttgtttgataatgca
gatggacgttttgaagggaccagtacgaaaacagtcatcaggtacaatggtactgtcacc
tggactccaccggcaaactacaaaagttcatgtaccatcgatgtcacgttttttccattt
gatctacagaactgttccatgaaatttggttcttggacttacgatggatcgcaggttgat
ataattctagaggaccaagatgtagacaagagagatttttttgataatggagaatgggag
attgtgagtgcaacagggagcaaaggaaacagaaccgacagctgttgctggtatccgcat
gtcacttactcatttgtaatcaagcgcctgcctctcttttatagcttgtttcttataata
ccctgtatcgggctctcatttttaactgtacttgtcttctatcttccttcaaatgaaggt
gaaaagatttgtctctgcacgtcagttcttgtctctttaactgtcttcctgctggttatc
gaagagatcataccttcatcttcaaaagtcatacctctgattggagagtacctggtattt
accatgatttttgtgacactgtcaattatggtaactgtcttcgctatcaacattcatcat
cgttcttcctcaacacataatgccatggctccttgggtgcgcaagatatttcttcacaag
cttcccaaactgctttgtatgagaagtcatgcggataggtacttcactcagaaggagcaa
actgagagtggtagtggaccaaaatcttctagaaacacaatggaagctgcactcgattct
attcgctacattacaagacacatcgtgaaggaaaatgatgtccgtgaggttgttgaagac
tggaaattcatagcccaggttcttgatcggatgtttctgtggacttttcttttcgtttca
attgttggatctcttgggctttttgctcctgtaatttataaatgggcaaatataataata
ccagttcatatcggaactgcaaataagtga
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