KEGG   Callithrix jacchus (white-tufted-ear marmoset): 108589964
Entry
108589964         CDS       T03264                                 
Symbol
PABPC1L2B
Name
(RefSeq) polyadenylate-binding protein 1-like 2
  KO
K13126  polyadenylate-binding protein
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03015  mRNA surveillance pathway
cjc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108589964 (PABPC1L2B)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108589964 (PABPC1L2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    108589964 (PABPC1L2B)
   03041 Spliceosome [BR:cjc03041]
    108589964 (PABPC1L2B)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108589964 (PABPC1L2B)
   mRNA cycle factors
    Stress granule specific factors
     108589964 (PABPC1L2B)
Spliceosome [BR:cjc03041]
 Complex C
  Other components
   Complex C specific factors
    108589964 (PABPC1L2B)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_Nup35 RRM_7 RBD_RDR6
Other DBs
NCBI-GeneID: 108589964
NCBI-ProteinID: XP_035144473
LinkDB
Position
X:67289879..67291534
AA seq 200 aa
MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL
ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCK
VACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ
STSADVKDFEEDTDEEATLR
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcctccctgtacgtgggcgacctgcaccctgaagtgaccgaggcaatgctgtacgag
aagttcagtccagctgggcccatcctctccatccgcatctgcagggacaagatcacccgc
cgctcattgggctacgcatatgtcaactaccagcaaccggtggacgccaagcgggccctg
gagaccctgaactttgatgtaataaagggcaggccagtgcgcatcatgtggtcccagagg
gacccgtcgctccgcaagagcggggtgggaaacgtcttcatcaagaacctgggcaagacc
atcgacaacaaggcactatacaacatcttctcggcgttcggcaacatcctctcctgcaaa
gtggcctgcgacgaaaaggggcccaagggctacgggttcgtgcacttccaaaagcaggaa
tccgccgagcgggccatcgatgtgatgaatggcatgttcctgaactaccgcaaaattttc
gtcgggagattcaagtcgcataaagaacgagaggccgaaaggggagcctgggccaggcag
tccactagtgctgacgtcaaggatttcgaggaagacaccgacgaggaggccaccttgcga
tga

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