Callithrix jacchus (white-tufted-ear marmoset): 118143590
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Entry
118143590 CDS
T03264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118143590
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118143590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
118143590
03041 Spliceosome [BR:
cjc03041
]
118143590
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118143590
mRNA cycle factors
Common to processing body (P body) and stress granule
118143590
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
hnRNP proteins
118143590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118143590
NCBI-ProteinID:
XP_054092948
LinkDB
All DBs
Position
8:1005898..1007465
Genome browser
AA seq
377 aa
AA seq
DB search
MEVKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKRGT
LTDCVVMRDPQTKRFRGFGFVTYSCEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGA
HLTVKKIFVGGIKEDTEQYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD
KIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGG
NFGGRGGYGGGGGGSRGSYGGGDGGYNGFGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGG
YGGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRNSGSPYG
GGYGSGGGNGGYGSRRF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccaccgcccggtcgcccccagcccgactccggccgtcgccgtcgccgc
cggggggaggagggccatgatccaaaggaaccagagcagttgagaaaactgtttattggt
ggtctgagctttgaaactacagatgatagtttaagagaacattttgagaaacggggcaca
cttacagattgtgtggtaatgagagatccccaaaccaaacgtttcaggggctttggtttt
gtgacttattcttgtgaagaggtggatgcagcaatgtgtgctcgaccacacaaggttgat
gggcgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggtgcc
cacctaacagtgaagaaaatttttgttggtggtattaaagaagatacggaacagtataat
ttgagagactactttgaaaagtatggcaagattgaaaccatagaagttatggaagacagg
cagagtggaaaaaagagaggatttgcttttgtaactttcgatgatcatgatacagttgat
aaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgaaaaaggcc
ctttctaaacaagagatgcagtctgctggatcacagagaggtcgtggaggtggatctggc
aattttatgggtcgcggaggaaactttggaggtggtggaggtaattttggccgtggtgga
aactttggtggaagaggaggttatggtggtggaggtggtggcagcagaggtagttatgga
ggaggtgatggtggatataatggatttggtgatggtggcaactatggcggtggtcctggt
tatagtagtagagggggctatggtggtggtggaccaggatatggaaaccaaggtggtgga
tatggtggcggtggtggaggatatgatggttacaacgaaggaggaaattttggtggtggt
aactatggtggtggtgggaactataatgattttggaaattatagtggacaacagcaatca
aattatggacccatgaaagggggcagttttggtggaagaaactcgggcagtccctatggt
ggtggttatggatctggtggtggaaatggtggatatggtagcagaaggttctaa
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