Callithrix jacchus (white-tufted-ear marmoset): 118148583
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Entry
118148583 CDS
T03264
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03410
Base excision repair
cjc04140
Autophagy - animal
cjc04217
Necroptosis
cjc04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118148583
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118148583
09143 Cell growth and death
04217 Necroptosis
118148583
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
118148583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
118148583
03400 DNA repair and recombination proteins [BR:
cjc03400
]
118148583
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
118148583
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
118148583
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
118148583
MMR (mismatch excision repair)
Other MMR factors
118148583
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118148583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
118148583
NCBI-ProteinID:
XP_035133218
LinkDB
All DBs
Position
16:complement(95384371..95387728)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGKMWSNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggataaggcccgttatgagagggaaatgaaaacctatattcct
cctaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcctgttctgctctgagtatcgcccaaaaattaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggaaagatgtggagtaacactgctgcagatgac
aagcagccttatgaaaagaaggccgcgaagctgaaggaaaaatatgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagccaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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integrated database retrieval system
