Campylobacter jejuni subsp. doylei 269.97: JJD26997_0572
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Entry
JJD26997_0572 CDS
T00573
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cjd
Campylobacter jejuni subsp. doylei 269.97
Pathway
cjd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJD26997_0572 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjd03021
]
JJD26997_0572 (rho)
03019 Messenger RNA biogenesis [BR:
cjd03019
]
JJD26997_0572 (rho)
Transcription machinery [BR:
cjd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JJD26997_0572 (rho)
Messenger RNA biogenesis [BR:
cjd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JJD26997_0572 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
Mor
OB_RNR_1st
AAA
ATPase_2
OB_RNB
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABS43788
UniProt:
A7H2L1
LinkDB
All DBs
Position
complement(514503..515801)
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AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPRELRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRILDLFT
PIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNISDRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRSAISQMDDVEALKFLYSKMLKT
KDNVELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacccacgttccagtggaaggttataaaatc
gaagaattaaaattattagatctagaaaatctagttaaaatcgccaatgaatgtgaaatc
gaaaatccaagagaattgcgccgccaagaacttatttttgaaattttaaaggcacaaaca
aaaaaaggtggcttcatactttttacaggaattttagaaatttcttctgaaggttatggc
tttttaagaggcatggactctaatcttagcgatagtgttaatgacgcttatgtttcaaat
tcacaaattagaaaatttgctctgcgtgtaggcgatatcgttacaggacaagttagagaa
cctaaagatcaggaaaaatactacgctcttttaaaaatcgaagcgatcaattatctgcct
ttacaagaagccaaagaaagacctttgtttgataacttaacccctatttttccaacagaa
aaaatcaaactcgaatatgatgcgatgaagcttacaggtcgtattttggatctttttacc
cctataggaaaaggacaacgcggactcatcgttgctccaccacgcacaggtaaaacagaa
cttatgaaagaacttgctactgctattgcaaaaaaccatcctgaaatgcatttaatcgtg
cttttagtcgatgaaagacctgaagaagttactgatatgcaaagatgtgtaaaaggcgaa
gtttttagttctacttttgatttacctgcttataatcatgtgcgtgtagctgaactcgtg
atagaaaaagccaaaagaatggtagaaacaggcaaagatgttatcatcttacttgatagc
atcacaagacttgcacgtgcttacaatactgcaactccaagcagtggaaaagtcctaagc
ggtggggtagatgctaatgctttacacaaaccaaaacgcttctttggtgcagctagaaac
atagaaaatggaggctctttaaccatagttgctacggctttaattgacacaggctcaaga
atggatgatgtgatttttgaagaatttaaaggtacaggaaatagcgaaatagttcttgat
agaaatatctctgatagaagaatttatcctgcgattaatatcatcaaatcaggaacaaga
aaagaagaattactccaaggcgtagcaaatcttcaaaaaatctgggcgatccgttcagcg
atttctcaaatggatgatgttgaggcgttgaaatttttatattctaaaatgcttaaaacc
aaagataatgtagaacttttatctataatgaacgagtaa
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