Campylobacter jejuni subsp. doylei 269.97: JJD26997_2058
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Entry
JJD26997_2058 CDS
T00573
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cjd
Campylobacter jejuni subsp. doylei 269.97
Brite
KEGG Orthology (KO) [BR:
cjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjd03032
]
JJD26997_2058 (topA)
03400 DNA repair and recombination proteins [BR:
cjd03400
]
JJD26997_2058 (topA)
Enzymes [BR:
cjd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JJD26997_2058 (topA)
DNA replication proteins [BR:
cjd03032
]
Prokaryotic type
DNA Topoisomerases
JJD26997_2058 (topA)
DNA repair and recombination proteins [BR:
cjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JJD26997_2058 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF1272
Toprim_2
Zn_ribbon_RPB9
DUF7385
Motif
Other DBs
NCBI-ProteinID:
ABS43615
UniProt:
A7H633
LinkDB
All DBs
Position
complement(1808033..1810135)
Genome browser
AA seq
700 aa
AA seq
DB search
MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIKIEDDEFIPEYRITSD
HSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKDENTLPRIVFHEITKSAIE
SALKNPRKLDMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQRGLSAGRVQSAALKIIVDRE
KEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLTITNKDRAKLILEACKNEAYNIN
DIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVNTHEGVMGVITYMR
TDSLNLAKEAIENARKFIQANFGKDYLPSKANVYTTKAKGAQEAHEAIRPTNLSFTPEIA
TKFLDKDELKLYTLIYNRFLACQINPAISQTQNVFVKNDRAVFKISGRKILFDGYYKVYG
DMDKDKILPNLKIGQNLKVQNLEMNSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTIS
ILTSRDYVKIDKKQLIPSEVAFNVIEVLEKNFSDIVDSKFTSNLENTLDEIAEDKADWQE
TLKEFYYPFMRKIEEGKTKIASQKTVTKLGESCPDCGGELAIRKGRFGEFVACLNFPKCK
YSRNLKNESKNESENTAAKTQTNGTGITCPSCQKGEIVERFSKRGKFYGCSVYPKCNFIS
KYKPSEEKCEECGETLVIKELKKGTFLECLKCKIKKEMKD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatttaatcatagtagaatctcctgcaaaagctaaaaccataggaaatttt
ttgggaaaagattatgaagtgattgcttctaaaggacatattagagatttacctaaatca
agctttgggattaaaatagaagatgatgaatttattccagagtatagaatcacaagcgat
catagcgccttagttaaagaacttaaaagcaaggctaaagatgccaaagaagtctatctt
gcaaccgatgaggatagagaaggagaagctatagcctatcatattgcaaaagctatagga
aaagatgaaaataccttgccgcgcattgtttttcacgaaattaccaaaagcgctatagaa
agtgctttaaaaaatccaagaaaattagacatgcattctgtcaatgctcaacaaactaga
cgccttttagatcgtatcgtggggtataagctcagccccttattagggcaaaaaattcaa
agagggcttagtgcggggcgtgttcaaagtgcggctttaaagatcatagtcgatcgtgaa
aaagaaattcgtgcctttgtacccctagaatactttagtatagatatgatttttcaaaaa
gatttagatgccgaactagttgagtttgacaaagctaagatagaaaaacttaccattacc
aacaaagatcgtgccaaacttatactagaggcttgtaaaaatgaagcttataatataaat
gatattgaaagtaaagaaagaaaaatcgctccaccgcctccttttatgacttcaactttg
caacaaagtgccagcaatcgccttggttttaaccctaaaaaaaccatgatgatagcccaa
aaactctatgaaggagtaaatactcacgagggtgtgatgggggttattacttatatgaga
actgatagtttaaatttagccaaagaagctatagaaaatgcaagaaaattcatacaagca
aattttggcaaagactatcttccaagcaaagcaaatgtatatactacaaaggccaaaggc
gctcaagaggcccatgaagctatacgccctacaaatttaagttttactccagaaattgcg
accaaatttttagacaaagatgagttaaaactttacacacttatttacaatcgcttttta
gcttgtcagataaatcccgctatctctcaaactcaaaatgtgtttgtaaaaaatgataga
gcagtttttaaaataagcggtagaaaaatcctttttgatggatattataaagtttatggc
gatatggataaggataaaattttacccaatcttaaaataggtcaaaatttaaaagtgcaa
aatttagaaatgaactcacattttaccgaaccaccttcaaggtattcagaagctggactt
gtaaaaaaacttgaaagtttaggcataggtcgcccttctacctatgcgccaactatttct
atacttacaagccgtgattatgtaaaaatagacaaaaaacaactcattcctagcgaagtt
gcttttaatgtaatcgaagtgcttgaaaaaaatttcagcgatatagtggatagcaaattt
acttcaaaccttgaaaatactctagatgaaatcgcagaagataaagcagattggcaagaa
actttaaaagaattttactatccttttatgagaaaaatcgaagaaggaaaaacaaaaatc
gccagtcaaaaaactgtcacaaaactaggagaaagttgtcctgattgtggcggggaactt
gctattagaaaagggcgttttggagaatttgtagcgtgtttaaattttccaaaatgtaag
tattcaagaaatttaaaaaatgaaagcaaaaacgaaagcgaaaatactgccgcaaaaacc
caaacaaatggcacaggtattacttgtccaagttgtcaaaaaggtgaaatcgtagagcgc
ttttcaaaacgcggtaaattttatggttgtagcgtttatccaaaatgcaattttataagc
aagtacaaaccaagtgaagaaaaatgcgaagagtgtggcgaaactttagtgataaaagag
cttaaaaaaggcacattcttagaatgtttaaaatgtaaaattaaaaaagaaatgaaggat
taa
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