Campylobacter jejuni subsp. jejuni 00-2425: N135_00727
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Entry
N135_00727 CDS
T02844
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cjei
Campylobacter jejuni subsp. jejuni 00-2425
Pathway
cjei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N135_00727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjei03400
]
N135_00727
DNA repair and recombination proteins [BR:
cjei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N135_00727
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N135_00727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA
SWI2_SNF2
Microtub_bd
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AGV56489
LinkDB
All DBs
Position
complement(674334..676307)
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AA seq
657 aa
AA seq
DB search
MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNIPTLIM
SHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFELGMQISQKELLKKLVDMGYKR
NDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGEARLKQAIKDIKTELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMC
KGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLELELSKENIFHQIMRPTGLLD
PLIELKDSDNQVEILFDEAKKIIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMG
RAARNVNGKVLLFCKKITKSMQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNE
ENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALEFEKAATLRDEINKLRDL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacttaccagcgaatttaaacccagtcccgatcaacaagaagccataaaaggc
atagtaaaaagcataaaaaaaggcaacaaatatcaaaccttactaggcgttacaggaagt
ggaaaaacctttaccatggcaaatgtcattaaagaacttaatatacccactcttatcatg
agtcacaacaaaagcctttgtgcacaactttatagcgaatttaaaggctttttttctaaa
aatcatgtggaatattttatatcttattatgattattatcaacctgaagcctatattcca
cgcactgatgttttcatagaaaaagacagctccactaatgaagacttagagcgtttaaga
ctgagtgctactgcttctcttttaagttatgaagatgtagtttgcatagctagtgtttca
gcaaattatggacttggtaatccaaatgaatacataggcatggttttaatctttgaactg
ggtatgcaaatttcacaaaaagaacttttaaaaaaacttgtagatatgggttataaaaga
aatgataatttttttgatcgtgcagattttagagttcaaggagatattatagatatttat
ccagcttattatgaagatgaagtagtaagacttgaattttttggcgatgagcttgatgct
atgtatcattacaatgttttagaaaataaaaaaggtaaagatttaaaacgctttatactc
tatcctacaagccagtttagcgtgggcgaagcaaggctaaaacaagcgataaaagacata
aaaacagaacttaacgaacgccttgcttattttgagcatgaaaataaactcgtagaatat
caacgccttaaacaacgcgttgaatttgatcttgaaatgcttacaagcacaggaatgtgt
aaaggagttgaaaactatgcaaggcatctaacaggacttaaagaaggcgatactccttat
acgctttttgattattttgcgattaaaaatagaaaatttcttgtcatagtcgatgaaagc
catgtttctttaccacaatttcgcggtatgtttgcaggagatagaagtagaaagcaaact
ttagtagattatggttttcgtcttccatcagctcttgataatcgtcctttaatgtttgat
gaatttatccataaagattgtcagtttctttttgtttcagccacccctgccccgcttgag
cttgaacttagcaaggaaaatatctttcatcaaattatgcgtccaacaggattacttgat
cctttgatagaacttaaagatagcgataatcaagttgaaattttatttgatgaagctaaa
aaaatcatacaaagaaacgaacgggttttagtaactgtactgactaaaaaactcgctgaa
gagcttacaaggtattatttagagcttggtataaaagtcaaatacatgcactcagatatc
gatgcaatagaacgcaatgaaatcataagaggcttaagaagcggtgcttttgatatgcta
attggcattaacttacttagagaaggacttgatttgcctgaggtttcgcttattgccatt
atggacgcagataaggagggttttttaagaagcactacaagtttaatccaaaccatggga
agagctgctagaaatgtcaatggtaaggttttgcttttttgcaaaaaaatcacaaaatcc
atgcaagaagctatggataccaccaatgaacgccgcaaacttcaagaagcttacaatcaa
aaacacaatatcacgccaacttcagtcaagcgacacatcgaagaaagtttaaaaaatgaa
gaaaacttaggagaaatttatcgcaaaggtaaaaaatttgaaaaaatgcctgctaatgaa
agagctaaaatcgtaaaagagcttcgtaaacaaatgcttgaagctgctaaagcgctcgaa
tttgaaaaagcagcgactttaagagatgagatcaataaattaagggatttataa
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