Campylobacter jejuni subsp. jejuni 00-2426: N564_01703
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Entry
N564_01703 CDS
T02841
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cjej
Campylobacter jejuni subsp. jejuni 00-2426
Pathway
cjej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N564_01703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjej03019
]
N564_01703
Messenger RNA biogenesis [BR:
cjej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N564_01703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGV52002
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All DBs
Position
complement(1661006..1662994)
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AA seq
662 aa
AA seq
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MDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNENDTPKIDQNSNKENSENSEN
KTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRISHENRLHPLKYNNSSEHKIRITPLG
GLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHA
HEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRRVYEIGEFD
IEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLL
SDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRVYQAITYGLKYGRKVC
VIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMAT
DEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEE
QKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMSDGDQVELCQKYVKRIK
TVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVA
DKHDHAFSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIF
VM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaacaaagagataaataaaaacgaacaaaatccgaactcaaattcaaaaaac
aataaacgctataaatataaaaatcgtagaaaaaaattagctgattctttgcaaaatgaa
aatgatactccaaaaattgatcaaaattccaacaaggaaaattctgaaaactcagaaaat
aaaactgagaaaaaaaagaagaaaaatcgcaatcttccttcaaaactcacaggtaatgaa
gattggcaaatcgctcttgcagaatgcatagaagctaaccgtatttcacatgaaaaccgc
ttacaccctttaaaatataataattctagcgagcataaaatccgcatcactcctttagga
ggtttaggagaaattggtggaaatatcagtgtttttgaaaccaataaagatgcaattata
gtagatataggtatgagttttcctgatggaactatgcatggggtagatattatcatccct
gattttgactatgtaagaaaaattaaagataaaattcgtggtatagtgatcactcatgca
cacgaagatcatatcggtgcagtgccttatttctttaaagaattccaatttcctatctac
gctacacctttggctttaggaatgatttcaaacaaatttgaagaacatggcttaaaagca
gaacgcaaatggtttcgccctgtagaaaaacgccgtgtttatgagataggcgaatttgat
atagagtggatccacatcacgcattctatcattgatgcttcagcgcttgcgatcaaaaca
aaagcaggaacgattatccacacaggtgattttaaaattgatcaaactccaatcgatggc
tatccaacagacttaggacgtttggcacattatggagaagaaggggttttatgtctttta
agcgatagtacaaattcgtacaaagaaggttatacaaaaagtgaaagctccgtagggcca
acttttgatcaaatctttgcacgtaccaaaggcagggtgatcatgagtacttttagttct
aatatccaccgcgtttatcaagctatcacttatggtttaaaatacggtagaaaagtttgt
gtgatcggtcgttctatggaaagaaatctttataccactatggaattaggctacatcaaa
cttgatagaaaaattttcatcgatgctgatgaagtaagcaaatataaagacaatgaagtg
cttatcgtaactacaggaagtcaaggcgaaaccatgagtgcgctttatagaatggcaact
gatgagcataaatttataaaaatcaaacctacagatcaagtgattatttcagctaaagcc
ataccaggaaatgaagcaagtgtttctgcggtgcttgactatcttttaaaagcaggagct
aaagtagcgtatcaagaatttagtgaaattcatgtaagcggacacgctagtatagaagag
caaaagcttatgctaacccttactaagcctaaatttttcctaccagttcatggagaatac
aatcacatcaccaaacacaaagaaacagcgatgaagtgcggtatccctgaaagaaatatt
tatcttatgagtgatggcgatcaagtagaactttgccaaaaatatgtcaaacgcataaaa
accgtaaaaacaggtaaagtttttgtagataatcaaatcaacaaacaaatcgccgatgat
gtagttatagatcgccaaaaacttgcagatagtggtatagtagttattatcgcacaaatt
gacaaagctacaaaaacactgatcaacaaaccaagagtatttagctatgggctagtagct
gacaaacacgatcatgcttttagcaaagatatggctgaagttttaggacaatttttcatc
aatgttaaagatgaagtactcaatgatccaagatttttagaaaatcaaatccgccaagtt
ttaagaaaacacatctttagaaagattaaaaaatacccaaccatagttccaactattttt
gtaatgtaa
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