Campylobacter jejuni subsp. jejuni R14: H730_02975
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Entry
H730_02975 CDS
T03187
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cjer
Campylobacter jejuni subsp. jejuni R14
Pathway
cjer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cjer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H730_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjer03021
]
H730_02975
03400 DNA repair and recombination proteins [BR:
cjer03400
]
H730_02975
Enzymes [BR:
cjer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H730_02975
Transcription machinery [BR:
cjer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H730_02975
DNA repair and recombination proteins [BR:
cjer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H730_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
Motif
Other DBs
NCBI-ProteinID:
AHW91519
LinkDB
All DBs
Position
511674..516227
Genome browser
AA seq
1517 aa
AA seq
DB search
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNESTKKVEYCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAATNSEAKKKTIIKRLKVVENFLNS
NLNANIDSDEAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKA
GAKGSHKICTGIDEVMMALESKCLDIHASIQTMVDGRKITTTAGRLIIKSILPDFVPENS
WNKVLKKKDIAALVDYVYKQGGLEITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQ
KAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITIEDCGTHEGVEINEITADGSIIETLEERILGR
VLAEDVIDPITNSVLFAEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKNIVANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYIL
RKYDLAKPNELAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILV
EDGEPVVQNIKAGEKGTLKFYILKGDGLDRVKNVKKSDIVKEKGFFVVIADENDREAKRH
YIPRESKIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAG
YSADEQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQ
ADILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIRMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIP
VGTGLYGEQNLKLKEQE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaagtaatagaaattaaagaagatgcaagacctagagattttgaagca
tttcaactaagacttgcaagtcctgaaaaaatcaaatcatggtcttatggagaagtaaaa
aaaccagaaactattaattatagaaccttaaagcctgaaagagatgggcttttttgtgca
aagatttttggacctataagagattatgagtgtctttgtggtaaatacaaaaaaatgcgt
tttaaaggcgttaagtgtgaaaaatgtggtgttgaagtagcaaattcaaaagtgcgtcgt
tctagaatggggcatatcgagcttgtaactcctgtggctcatatttggtatgttaattct
cttccaagccgtataggaacgcttttgggtgttaagatgaaagatcttgagcgtgtgctt
tattatgaagcttatatcgttgaaaatccaggcgatgctttctatgataatgaaagcacc
aaaaaagtagaatattgtgatgttttaaacgaagagcaatatcaaaatttaatgcaacgc
tatgaaaatagtggctttaaagcaagaatgggtggagaagttgttcgtgatttacttgca
aatttagatcttgtggcacttttaaatcagcttaaagaagaaatggcggctacaaattca
gaggctaagaaaaaaaccatcattaaacgcttaaaagtagtagaaaatttcttaaattca
aatttaaacgccaatatcgatagtgatgaagccgtaccaaatcgtcctgaatggatgatg
attacaaatcttccagttttaccgccagatttgcgtcctttagtggctttagatggtgga
aaatttgcagtttctgatgtgaatgacttatatcgtcgtgttatcaatagaaatacacgt
cttaaaaaacttatggaacttgatgcacctgaaatcattatcagaaatgaaaaaagaatg
cttcaagaggctgttgatgcactttttgacaacggtcgtcgtgctaatgctgtaaaagga
gcaaataaacgcccattaaaatctttaagtgaaatcatcaaagggaaacaaggacgtttt
aggcaaaatctactaggtaaaagggtggatttctcaggtcgtagcgttattgttgtaggt
ccaaaacttagaatggatcaatgtggtttacctaaaaaaatggctttagagctctttaag
ccacatcttttagctaagcttgaagaaaaaggttatgcaaccacagtaaaacaagctaaa
aaaatgatagaaaataaaaccaatgaagtttgggaatgtttagaagaggtagtaaaaggg
catcctgttatgctaaaccgtgcgcctactttacataaactttctattcaagcttttcat
cctgttttagtggaaggtaaggctatacaacttcatcctttggtttgtgcagcatttaac
gcagactttgatggggatcaaatggcggtgcatgtgccactttctcaagaggccattgcg
gaatgtaaggtgcttatgctttcatcaatgaatattcttttgccagcaagcggtaagtct
gtaaccgttccatcgcaagatatggttttaggaatttattatctttcattggaaaaagcc
ggtgctaaaggttcgcataaaatttgtacaggcattgatgaagtgatgatggcgcttgaa
agcaagtgtttggatattcatgcgagtatacaaactatggtagatggtagaaagattacc
actacagcaggaagattgattattaaatccattttacctgattttgtgcctgaaaatagc
tggaataaagtcttaaagaaaaaagacattgctgcgcttgtggattatgtttataaacaa
ggtggtttagagattacagcaagtttcttggatagacttaaaaatttaggttttgaatat
gcaactaaagcaggtatttcaatttcgattgcagatattattgttcctaatgataaacaa
aaagctatcgatgaagcaaaaaaacaagtaagagaaattcaaaattcttataatctcggt
ttgattacttcaggggaaagatacaataaaatcattgatatttggaaaagtacaaacaat
gttctttcaaaagaaatgatgaagcttgtagaaaaagataaagaaggttttaactctatt
tatatgatggcagattctggtgctaggggtagtgcagctcaaatttctcagcttgctgcg
atgagaggacttatgaccaaacctgatggttctattatcgaaacgcctattatttcaaat
ttccgtgaagggctaaatgttcttgaatactttatttcaactcacggtgctagaaaaggt
cttgcagataccgctcttaaaacagcaaatgcgggttatttgacaagaaaactcatcgat
gttgcacaaaatgtaaaaattaccattgaagattgtggaacacatgagggtgttgaaatc
aatgaaattaccgcagatggttctattatagaaactttagaagaaagaattttaggcagg
gttttagctgaggatgtgattgatcctattacaaattctgtgctttttgcagaaggtact
ttaatggatgaggaaaaagcaaaaattcttggcgaaagcggtataaaaagtgtcaatatc
cgcactcctattacctgcaaagctaaaaaaggaatttgtgcaaaatgttatggtatcaat
cttggtgaaggtaaattagtaaaaccaggcgaagcagtgggaattatttccgctcaatct
atcggtgaaccaggaacgcagctaactctaagaactttccatagcgggggaactgcaagt
acggatttacaagatagacaagtaagcgcacaaaaagaaggttttataagattttataat
cttaaaacttataaaaacaaagaaggtaaaaatatcgtagcaaatcgtagaaatgcggcg
gttttacttgtggagccaaaaatcaaaactccatttaaaggtgtgattaatatagaaaat
attcatgaagatgtgattgtttctattaaagataaaaaacaagaagtaaaatacatatta
agaaaatacgatcttgctaaaccaaatgaattagcaggtgtaagtggcagtatagatgga
aaactttatttgccatatcaaagcggcatgcaagtagaagaaaatgaaagtatcgtagaa
gtgattaaagagggttggaatgtaccaaatcgtattccttttgcgagtgaaattttagta
gaagatggcgagcctgtagttcaaaatatcaaagcaggcgaaaaaggaacactcaaattt
tacatccttaaaggcgatggtttagatagagtaaaaaatgttaaaaaaagtgatattgtt
aaagaaaaaggattctttgtagtgattgctgatgaaaatgatagagaagcaaaaagacac
tatatcccaagagaatctaagatagaatttaacgatagtgaaaaaatcgatgacgcaaat
actatcattgcaagtgctcctaaaaaagaaagaaaagtgattgcagaatgggatgcttat
aataatactatcattgcagaaattgatggtgttgtaagctttgaggatattgaagcaggt
tatagtgctgatgagcaaattgatgaagctacaggtaagcgttctttagtaattaatgag
tatttacctagcggagttagaccaactttggtaattgcaggaaaaggtgataaagctgtg
cgttatcaccttgaaccaaaaaccgttatttttgttcatgatggcgataaaattgctcaa
gcagatattttagcaaaaactccaaaagcagcagctaaatcaaaggatattacaggaggt
cttccaagagtttctgaactttttgaagcaagaaaaccaaaaaatgcggctgtgattgca
gaaattgatggtgttgttcgttttgataagcctttgcgttctaaagaaagaattattatc
caagcagaagatggaacaagtgctgagtatttaatcgacaaatcaaaacatattcaagta
agagatggagagtttattcatgcaggtgaaaaacttacagatggagttgtttcgagtcat
gatgtgcttaaaattttaggtgaaaaagccttgcattattatttgatttctgaaattcag
caagtttatcgcggacaaggtgttgtgatttctgataaacatatagaagttatcgtttct
caaatgctaagacaagtaaaagttgtagatagtggacatacgaaatttattgaaggtgat
ttggtttcaagacgtaaattccgtgaagaaaatgaaagaatcattagaatgggtggagaa
ccagctattgccgagcctgtgcttttaggtgtaacaagagcagcgattggaagtgatagt
gtgatttctgcggcttcattccaagaaactaccaaagttttaactgaagcaagtatagca
ggtaaatttgactacttagaagatttaaaagaaaatgttattctaggtagaatgattcct
gttggaacagggctttatggcgaacaaaatttaaaacttaaagaacaagaataa
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integrated database retrieval system
