Campylobacter jejuni subsp. jejuni R14: H730_07225
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Entry
H730_07225 CDS
T03187
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cjer
Campylobacter jejuni subsp. jejuni R14
Pathway
cjer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H730_07225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjer03019
]
H730_07225
03016 Transfer RNA biogenesis [BR:
cjer03016
]
H730_07225
Enzymes [BR:
cjer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H730_07225
Messenger RNA biogenesis [BR:
cjer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H730_07225
Transfer RNA biogenesis [BR:
cjer03016
]
Prokaryotic type
tRNA degradation factors
H730_07225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
DUF2501
CTD9
DUF6599
Motif
Other DBs
NCBI-ProteinID:
AHW92280
LinkDB
All DBs
Position
1293251..1295410
Genome browser
AA seq
719 aa
AA seq
DB search
MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREEKQVEEDFLPLTVQYIE
KAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGYAYPTQIVVMVLSADPKVD
LQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNPNNEELQNSTLDLYVAGVKDE
LLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNELSEDEILEALNLAQKAILNGSNA
YEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQIKEAINQMAKSERASELNKIAKEI
LNLEITKDWSEESVLNTLAKVKRKLIREQILNEGKRADGRSLNEVRPISIETNILPNAHG
SCLFTRGQTQALVVATLGGENDSQMIDLLTEKNPISERFMVNYNFPGFSVGEASPIKAPG
RRELGHGNLAKRALYPSVDENYPYVIRLVSEILESNGSSSMATVCGGSLALKAAGVPSLK
LVAGVAMGLIFEDNKYAVLTDIMGLEDHDGDMDFKVAGSKDGVTALQMDIKLGGIDQEIL
KQALYQAKEGRIHILNIMEEAAKEIIVNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIV
EKFGVSIDLDREKGEVKIAGSQNEQIKAAKDYIINITSSQKGTKKGPKDKDISGFELGQE
FQGIVKKIAPFGAFVELKNGVDGLLHSSKSKHLNLSENQSLKVKISEIKNGKISVDLCE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacagcatagaaattaacaaaaatacagaaatatttgatatagacaaagtcgcc
aaacaagctgccggtgctgttttaatgagacaaggcaaaagcgttgttctagctacagtt
gcaagagaagaaaaacaagttgaagaagattttttacctctaaccgtccaatacatcgaa
aaagcttatgccgcaggaaaaatccctggtggttatgtcaaaagagaaaccaagccaagc
gatgcagaaaccttaacagcacgcattattgatagaagcttacgccctctttttccaaaa
ggctatgcttatccgactcaaatcgttgtgatggttctctcagctgatcctaaagtagat
ttacaagtaatgagcttaaatgccgcaagcgtggcactttatcttagtgatatacctatg
aaagctccagtatgtggtgtgcgtataggaaagatagatggaaatttcatactcaatcca
aacaatgaagagcttcaaaatagcactctagatctctatgtagcaggtgtaaaagatgag
cttttgatgatagaaatgagagccttacctgatcaaaaagaaaatgaaatctttatcgaa
gctccttatgctgatgttttaactcaaaccacttcacaaaatatgaatgaacttagcgaa
gatgaaattttagaagctctaaatttagctcaaaaagctatattaaatggttcaaatgct
tatgaagaagcctttagcaaacacaaaaaaaattctcaaatcgaactaaaaaatgagatt
gaacatcctgaaattttagcttttatagaaaataatttccaaaaacaaatcaaagaagcc
atcaatcaaatggcaaaaagcgaaagagcaagcgaactaaataaaatcgctaaagaaatt
ttaaatcttgaaatcactaaagactggagcgaagaaagtgtcttaaataccttagctaaa
gtcaaacgcaaacttattcgtgagcaaattttaaatgaaggcaaaagagctgatggtaga
agtttaaacgaggttcgtcctattagtatagaaaccaacatcttaccaaacgctcatggt
tcttgtcttttcactcgtggacaaactcaagccctagtggttgcaaccttaggcggagaa
aacgattctcaaatgatagacttgcttacagaaaaaaatcctataagcgaacgctttatg
gtaaattataattttccaggtttttcagtaggcgaagcaagtcctatcaaagctccagga
agaagagaactaggacatggaaatttagccaaaagagcactttatccaagtgtggatgaa
aactatccttatgtaatccgcttagtcagtgaaattttagaaagcaatggctcaagttcc
atggcaacggtttgtggcggatctttagccttaaaagcagcaggagtgccaagcttaaaa
cttgttgcaggagtagccatggggcttatctttgaagataacaagtatgctgttttaaca
gatatcatgggacttgaagatcatgatggggatatggactttaaagtagcaggaagcaaa
gacggcgttactgctcttcaaatggatataaaactaggtggaatcgatcaagaaatacta
aaacaagctttataccaagccaaagaaggaagaattcacattctaaatatcatggaagaa
gccgccaaagaaatcatagtcaatgaagaagttttacctaaacttgagctttttagcgtt
gatccttcaaaaatcgttgatatcataggacaagccggaaaaaccatcaaagaaatcgta
gaaaaatttggcgtttctatagacttagatcgcgaaaaaggtgaagtaaaaatagcaggt
agtcaaaacgagcaaatcaaagccgcaaaagactacatcataaacatcacaagctctcaa
aaaggaactaaaaaaggccctaaagacaaagatatatcaggctttgaacttgggcaagaa
tttcaaggtattgttaaaaaaatcgctccttttggagcctttgtggaacttaaaaatggt
gttgatggtttattgcatagttcaaaaagcaagcatcttaatttaagcgaaaaccaaagc
ttaaaagttaaaatcagcgaaattaaaaacggaaaaatttctgtggatttgtgtgagtga
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