Cryptomeria japonica (Japanese cedar): 131026667
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Entry
131026667 CDS
T10556
Name
(RefSeq) LOW QUALITY PROTEIN: thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131026667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131026667
Spliceosome [BR:
cjf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
131026667
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Motif
Other DBs
NCBI-GeneID:
131026667
NCBI-ProteinID:
XP_057812583
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All DBs
Position
11:562792009..562792745
Genome browser
AA seq
138 aa
AA seq
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MSYLLPHLHSGWAVDQAILSEGERLVVVRFGHDWDDTCMQMDEVLASVAESVKNFAVIYX
EVPDFNTMYKLYDPCTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGAR
KGRGLVISPKDYSTKYRY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcttcttcctcatctgcactcaggatgggctgtggatcaggcaattctgtca
gagggggagcgtttggttgtggtccgattcggccatgactgggacgacacatgcatgcag
atggacgaagttcttgcaagcgtggcagagtctgtcaagaattttgccgtcatttacnna
gaggtccctgatttcaacaccatgtataagctctatgatccctgcactgtcatgttcttc
ttccgtaataagcacattatgatcgatttggggacaggtaataataacaagatcaattgg
gctcttaaagataagcaggagtttattgacatagtcgagactgtttacagaggtgccaga
aaaggccgtgggcttgtcatatctccaaaggattattctactaagtatagatattaa
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