Cryptomeria japonica (Japanese cedar): 131027376
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Entry
131027376 CDS
T10556
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131027376
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131027376
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
131027376
NCBI-ProteinID:
XP_057813393
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Position
1:complement(46314131..46318823)
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AA seq
410 aa
AA seq
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MAGAMDRQRPGVGRTGAASRWAGEAPGTCERRRWQISARAAAGEPARRWRDDRSGATAVG
TCNLRTMANDNCPEDADGTRCAFSACASGNALPRCAFGFASTVTGGAGGQSYVVTSSEDS
PQSPQPGSLRYGIGKGNVWITFSQSMKIILKDRLWIQSSTTIDGRGFSVTIGGGQLVMRE
VSNVILHNLQIDAPTNYDQNSIYVDGDSTLVWMDHLTSVDPSRMTGTGKIISVSNASTDV
TISNSLLANAFYSVLLGSSDEERQDTCMRVTVYRNWFKDSVERMPHCRWGYCHVVNNLYT
NWTYFAIGARTHATIECEANVFEAGSKKEIIPWDSSLAKTLDQTPHIDSKDDLLLNGATF
HQFLKTSAVTASPPHKVNSPPVLPPQQLSSLLRRCAGALDPSQARACLAP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccatggaccggcagcgaccgggagttgggaggacgggagctgccagccgg
tgggcgggggaggcaccgggaacctgcgagcgccgacggtggcagatctcggcgcgggcg
gcagcaggagaacctgcacggcggtggcgcgatgatcggagcggcgctacagcggtaggt
acctgcaacctgcgcacaatggcaaatgacaattgccctgaggatgcagacggaacccgc
tgtgctttctctgcctgtgccagcgggaatgcactgccccgctgcgcgtttgggttcgct
tccaccgtgacgggaggcgctggcggacagtcttatgttgtcacgagctctgaagactcc
ccgcagtccccgcagccgggaagtctgagatacggcattggcaagggaaacgtgtggatc
accttctcccagagcatgaagatcattctcaaggacaggctgtggattcaaagctccacc
accattgacggccggggcttcagcgtgacaattggcggcggccagctcgtcatgcgagaa
gtctcgaatgtcattctgcacaacctacagatcgacgcccctacaaactatgaccagaac
agcatttatgtggatggggattccacactcgtgtggatggaccatctcacatctgtggat
cccagtcgcatgacaggcactggaaaaatcatctctgtcagcaacgctagcaccgacgtc
accatttcaaactcgctcctcgccaatgcattctatagcgttctgctgggcagctcagac
gaggagcggcaggacacttgtatgcgtgtcacggtgtatagaaactggttcaaggattcc
gttgagcgcatgcctcattgccggtggggatattgccatgttgttaacaacctctacacc
aactggacttactttgccattggcgcccgcactcatgccaccatcgagtgcgaagctaat
gtatttgaggcgggctccaaaaaagagataatcccctgggattctagtttagccaaaaca
ttagaccagaccccccacatcgactccaaagacgatctgctcctcaatggggctactttc
catcagtttcttaaaacatcagcggtaactgcttctccccctcacaaagtaaactcccca
cctgtgttgccacctcaacaactttcttctctgttgcgacgctgcgcaggagcacttgat
ccttcacaagcccgtgcatgtcttgctccctga
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