Cryptomeria japonica (Japanese cedar): 131027806
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Entry
131027806 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131027806 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131027806
Enzymes [BR:
cjf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
131027806
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131027806
Prokaryotic type
131027806
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
131027806
NCBI-ProteinID:
XP_057813881
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All DBs
Position
3:645893763..646063128
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AA seq
393 aa
AA seq
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MNTPKLLQEEAETEQANKKMSQRSPGVQRYLVAVEYIGTNFVGFQKQPNGRTVQGMLEDA
FSKFIGQPVSSACSSRTDAGVHALANVCHVDVERISKRKPGEVLPPHKPGVVKSAVNHFL
QKNAGDMSVVDVQCVPITFHARFKAQERTYYYRILSGIEPLSTFEKDRAWHVPEDLNVSL
MKEACKVLIGHHDFSSFRASGCQAKSPIKSLTQLDVFEIPAWPAFPSSTERVCRVDTPDR
KDAHLSFERKDNIDKPVQNVGDISLSCEHPVERKIPVLCPEDHEDYNEGEVIEFGCRRGH
HGYVVTARAPSFLYHQVRLLVGALKCVGTGKLSVEDVERILKARSIMVAPPMAPAHGLYL
AKVKYDFSSNKVNQIEDDGLSVLGAPICNPPLT
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccaaaattattgcaggaagaagcagaaacagagcaggcaaataaaaagatg
agccagaggtcgcctggggttcagagatacctcgttgcagtcgaatacattggcacaaac
tttgttggtttccagaaacaacctaatggcaggacagttcaaggcatgctcgaagatgca
tttagcaaatttattggccaacctgtttctagtgcatgctcaagcagaacggatgctgga
gtacatgcattagcaaatgtatgccatgtggatgttgagcgcatcagtaagcgaaagcct
ggtgaagtgttacctccacacaaacctggagttgtcaaaagtgctgtcaaccatttttta
cagaaaaatgcaggtgatatgtcagtggttgatgttcaatgtgtgccaataactttccat
gctcgcttcaaagctcaggagcgcacatattactatagaattctttcgggcatagaacct
ctgtccacatttgaaaaggatcgggcatggcatgtccctgaagacttgaatgtctctctt
atgaaggaggcatgcaaagttcttataggacatcacgactttagctctttcagggcctct
ggatgtcaggcaaaatcccccatcaaatctttgactcaacttgatgtatttgaaatccca
gcatggcctgcctttccatcaagcacagagagagtttgtagagtagatactccagataga
aaggatgcacatttgagttttgaaaggaaggacaatattgacaaacctgttcaaaatgtt
ggggacatctctctttcttgcgaacaccctgtggaacgcaagataccagtactttgtcct
gaagatcatgaggattataatgaaggggaagtgattgaatttggttgtcgaagggggcat
catggctatgtagtgacagcaagagcaccatcatttttgtatcatcaggtacgattactt
gttggtgctttgaagtgtgttggaactggaaaattgtcggttgaagatgttgaaagaatt
cttaaagcacgatcaataatggtggcaccacctatggcacctgctcatggtctttatctt
gcaaaggtcaagtatgactttagttctaataaagtgaaccaaattgaggatgatggatta
tctgtattaggagctcctatctgtaatcctcccttgacttga
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