Cryptomeria japonica (Japanese cedar): 131028195
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Entry
131028195 CDS
T10556
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131028195
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
131028195
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
131028195
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PPR_long
PRORP
PPR_2
PPR_3
RNase_Zc3h12a
Motif
Other DBs
NCBI-GeneID:
131028195
NCBI-ProteinID:
XP_057814419
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All DBs
Position
1:15395909..15469901
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AA seq
676 aa
AA seq
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MVGKYIANIVRTSHLLNRSLSFTFTLVRPKNCFPKQNNLILERNLHVLSTQYTVLCRLSQ
QKHKLFPRNICSDIQNVTADGGKKKKRSKDREQGQLKYELDMCSKRGDLMEALNIYDSTK
KRGIDLKQHHYNVLLYLCSSAAMGMLRPSDAAKLDKGLEEVAEISDEVRHLALRRGFEIY
EQMSLDKIAPNETTFTAAARLAMAKNDGNLAFELVKRMAENNIPPRLRSYGPALSAFCKE
NKADMAYEVDDHMTASGVQAEEPELGMLMKVSVQSFREEKVYSLLHRLRSSVRQVSRDTA
YVIEKWFKNGEAGKLGVPTWDRAKIRDALIAGGGGWHGQGWLGQGNWTVEHAAIDHKGVC
RVCGEKLVTIDIDPLETENFAKSVGSLACERESKSFESFQEWLEKHGPFDAIVDGANVGL
YKDATFNYSRLNNIAIGIQQRSPSKKFPLIIIHNRRSKGGLADNPRNKQVIEKWRKSGAL
YTTPTGSNDDWYWLYAAVRFKSLIVTNDEMRDHLFELLGSSFFPIWKERHQVKFSGTSRN
PQFHMPPPFSIVIQESETGSWHIPIMGGDDIETPRDWLCITRCKSNVSQERVSESNTQLT
DFKHIGAQEANRDICGVEETKILRSANGNDTALNSFNKSFKSKTRKKDTKEQRSSPLSPR
KSLHPRKIRKEQNLLH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcaagtatatcgcgaacattgtgagaacatcccatctcttaaacagatcgcta
agcttcacattcacactcgttcgccctaaaaactgcttccccaaacaaaacaacctgata
ttggaaagaaacctccacgttttaagcacacagtacacagttctctgcagattgtctcag
caaaaacataaattatttccaaggaatatctgttctgatatccagaacgttaccgcagat
ggggggaaaaagaagaaaagaagcaaagatagggagcaaggtcagctcaagtacgagttg
gacatgtgttcgaaacgtggggacctcatggaagctttaaatatctatgatagcacaaag
aaacgaggcattgatctaaaacaacaccactacaatgttcttctttatctctgttcttcg
gcggccatgggcatgctgaggccctccgatgcggccaaattggacaagggcttggaggaa
gtcgctgaaattagtgatgaggttaggcacttagcgctgagaagaggatttgagatatac
gagcagatgagcttggataaaatagcgccaaatgagaccacgtttacagccgccgccaga
ttagccatggctaaaaatgacgggaatttggcatttgagctggtgaagagaatggcggag
aacaatattccgccgaggctgaggtcatatgggcctgcactgagcgccttttgcaaggag
aacaaggcggacatggcatacgaagtggatgatcatatgactgcgtcgggtgtccaggct
gaggagccggaattggggatgttgatgaaggtcagtgtgcagtcttttagggaagagaag
gtttattctttgctgcaccggttgaggagtagtgtgaggcaagtgtcaagggatactgct
tatgttattgagaagtggtttaagaatggggaggctgggaaacttggagtgcctacttgg
gaccgggcgaagatcagggatgccctcattgcaggcggtggtgggtggcatgggcagggc
tggttggggcagggcaattggactgtggagcatgctgccattgatcacaagggtgtttgc
agggtttgtggggagaagctggttactattgatattgatccactcgaaactgagaatttt
gctaagtctgtcggctcattggcttgtgagagggagtctaaatcctttgaaagttttcag
gaatggctggaaaagcatggaccatttgatgctatagttgatggtgcgaatgtgggtctt
tataaggatgctaccttcaattattctcggttaaacaatattgccattggcatacaacaa
aggagcccatcaaagaaatttccacttattatcattcacaatagacgttcaaaaggaggg
cttgctgataatcctagaaataagcaagtaattgagaaatggagaaaatctggtgcacta
tacacaactcctactggatcaaatgatgattggtattggctgtatgcagctgtaagattc
aagagccttattgtgacaaatgatgaaatgagagatcacttatttgaattgctagggagt
agctttttcccaatatggaaggaaagacatcaggtcaagttttctggaaccagtcgtaat
ccgcagtttcacatgccaccccctttttcaattgtaattcaggaatctgagactggctcc
tggcacatacccataatgggtggcgatgacattgagactcctagggactggctctgtatt
accaggtgcaagagtaatgtatcacaggaaagggtatcagagagtaacacgcaactaaca
gacttcaagcatatcggtgcccaagaagccaacagagatatatgtggagttgaagagacg
aaaattttaaggtctgcaaatggaaacgacacagctctgaattcgtttaataaaagcttc
aagagtaagaccagaaaaaaagatactaaggagcaacgcagttctcctttaagtccccgt
aaatctttacacccaaggaagatacgtaaagagcagaacttgctgcattga
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