Cryptomeria japonica (Japanese cedar): 131028202
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Entry
131028202 CDS
T10556
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03015
mRNA surveillance pathway
cjf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131028202
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131028202
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjf01009
]
131028202
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131028202
03036 Chromosome and associated proteins [BR:
cjf03036
]
131028202
Protein phosphatases and associated proteins [BR:
cjf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131028202
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131028202
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131028202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
HEAT_EZ
Htt_N-HEAT_1
PDS5
SCD
Adaptin_N
Cnd1
CLASP_N
TAF6_C
TPR_TNPO3_IPO13_3rd
INTS7_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
131028202
NCBI-ProteinID:
XP_057814433
LinkDB
All DBs
Position
1:complement(16228836..16310820)
Genome browser
AA seq
587 aa
AA seq
DB search
MATIDEPLYPIAILIDELKNEDIQLRLNSTRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLIMAEELGVFIPYVGGVDYAHVLLPPLESLCTVEETCVRDKAVESLCRIGSKMKEG
DLIDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSASELLKAELRSIYGQICQDDMPMVR
RSAASNLGKFAATVEPQYLKIDIMSFFNDLTHDDQDSVRLLAVEGCAALGKLLEPQDCAE
HILPIILSFSQDKSWRVRYMVANQLYELCEAIGSESTRMDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPQHAIQHILPCVKDLAADSSQHVRSALASVIMGMAPVLGKEATLEQLL
PIFLALLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFNDKLGSLCMKWLEDQVFSIRDAAANNLKRLTEEFGHEWAMQHIVPQV
LQMINNPHYLYRMTILHTISLLAPVMGPEITSQRMLPVIINVAKDRVPNMKFNAAKVLQA
IIPILDQSVIEQTVRPCLIELTEDPDVDVRYFAGQALQACNDVTMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattgatgagccattgtatccaattgctattcttatagacgaacttaaaaat
gaagacattcagttacgactaaactccacacgaaggctttcaacaattgctcgtgctctt
ggtgaagagaggacaaggaaggaattaataccatttttgagtgaaaacaatgacgacgat
gatgaggttttacttataatggctgaagaattgggagtttttattccatatgttggtgga
gttgactatgctcatgttttgctgcctcctttggaaagtctttgtacggtagaggaaaca
tgtgtgagagataaagctgttgaatcactatgccgaattggttctaagatgaaggaggga
gatttgattgattggtttattccacttgtcaagaggcttgctgctggtgaatggttcaca
gcacgtgtttctgcatgtgggctttttcatattgcatacccaagtgcatcggaactgtta
aaggcagaattacggtccatatatggtcaaatttgccaggatgatatgccaatggtcagg
cgatctgctgcatcgaacttgggaaaatttgctgcaacagttgaaccacaatatttaaag
atagatatcatgtcatttttcaatgaccttactcatgatgatcaggattcagtaaggctg
ttagctgtggagggatgtgcagcacttggaaagctgttggaacctcaggattgtgcagag
catattctccctatcattctctctttctcccaggataagtcctggcgagttcgttacatg
gttgcaaatcaattatatgagctttgtgaggcaattggttctgagagtaccaggatggat
cttgtgcctgcatatgtacgattgttgcgtgacaacgaagcagaagtgcgtattgcggct
gcaggaaaggtgacaaagttttgtagaattttggatcctcagcatgctattcagcacatc
cttccttgtgtgaaggacctggcagcagattcttctcagcatgtgcgctctgcgctggct
tctgttatcatgggaatggcacctgtcttgggaaaggaagcaacacttgaacaacttctt
ccaatttttcttgctcttttgaaggatgaattccctgatgtccgacttaacataataagc
aagctcgatcaagtgaatcaggtgattggaatcgatcttttatctcagtcccttttgcca
gccattgttgagcttgcggaagacaggcactggagagttcgacttgcaataattgaatat
attcctttgctggctagtcagctgggaattggcttctttaatgataaattgggttcactc
tgcatgaagtggcttgaagaccaggtcttctcaattcgtgatgcagctgccaacaatttg
aaacgacttactgaagaatttggccatgaatgggctatgcaacatattgttccacaggtc
ctgcagatgatcaataacccacattacttgtatcgcatgacaattttgcatactatttca
cttctagcccctgtcatgggtccagaaattacaagccaaagaatgttacctgttatcatc
aatgtagccaaggatagggttccaaatatgaaatttaatgcagcaaaggtcttgcaggcc
atcattccaattcttgatcagtctgtcatagagcagactgttcgtccttgcttaattgag
ctaactgaagatcccgatgttgatgtaagatactttgccggccaagcactacaggcctgt
aatgatgtcacgatgtcatcttga
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