Cryptomeria japonica (Japanese cedar): 131028540
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Entry
131028540 CDS
T10556
Name
(RefSeq) protein ELC
KO
K12183
ESCRT-I complex subunit TSG101
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03250
Viral life cycle - HIV-1
cjf03272
Virion - Hepatitis viruses
cjf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131028540
03272 Virion - Hepatitis viruses
131028540
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131028540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131028540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131028540
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
131028540
Exosome [BR:
cjf04147
]
Exosomal proteins
Proteins found in most exosomes
131028540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
EURL
Med21
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
131028540
NCBI-ProteinID:
XP_057814806
LinkDB
All DBs
Position
4:complement(198948395..198950180)
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AA seq
384 aa
AA seq
DB search
MTPTATSTTAGQDAQFLNRVLSQRGSSALPYEEDLQCHIRQHLLSLMQAFPNLIVQPEMF
THNDGRTVDLLKAEGTIPVLYKQVTYNIPVRIWLLEQYSKHPPLVYVTPTRDMEIKRGHI
LVDPSGLVSCPYLKDWAFPSSNLVEMVNNLSFLFGKSPPVYTTMQSAAQNQNNHVGGHGA
LVSHSKQKRLAPEPRGKRSSHKARDEQIQKTALMNKLVETFHKDMAELTKTMEMEMEGLL
SIPGVLKQRGEQAEKGIGELQEEKEKLEQQVQSILACSDELETWLQEKESKESNLSIDHV
CQPCDVLSNQMLESTSADLAIEDILYCLDKAVQDGAITVKDYLKNVRTMSREQFFNRAMS
IKVSAAQLQVQVANMADTAQTYDT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacacccactgccacttcaacaacggcggggcaggatgcccaattcctcaacagagtc
ctatcccaaagaggttcctctgcattgccctatgaagaggaccttcaatgtcacatcagg
cagcacttgctctctctcatgcaagctttcccgaacctgatagtacagcctgaaatgttt
actcacaatgatggaagaacagttgatctcttaaaggcagaaggcactataccagtgctc
tacaaacaggtaacatacaacatccctgtcagaatttggcttttggagcagtattccaaa
cacccacctctcgtatatgtgacacctacaagggacatggaaataaaaagggggcatatc
cttgtagatccttcaggcttagtatcatgtccttatttgaaagattgggcttttcccagc
tccaatttagtagagatggtgaacaatctaagcttcctctttggtaaaagcccacctgtg
tatactaccatgcagagtgctgcacaaaatcagaacaaccatgttggtggtcatggagct
cttgtgtcacatagtaagcagaagcgcttagctcctgagccaaggggtaaacgatcttct
cataaggctcgtgatgaacaaatccagaaaactgcactaatgaataagctggtagagact
ttccacaaagacatggctgaattaaccaaaaccatggagatggagatggaaggactttta
agtataccgggggtattgaaacagagaggggagcaggcggaaaaaggtataggagagctg
caggaggagaaggagaaacttgagcagcaggttcaatccatactcgcatgtagtgatgag
cttgaaacatggctacaggagaaagagagcaaagaatccaatttaagcatcgatcatgtt
tgccagccttgtgatgttttgtccaatcaaatgcttgagagcacatcagctgatttggct
attgaggatatcttgtattgtttggataaggctgtacaggatggagcaattactgttaag
gattatctgaagaatgtgaggacaatgtccagagagcaattcttcaaccgtgcaatgtct
attaaagtgagtgcagcacaattgcaggtgcaggttgctaacatggcagatacagctcag
acttatgacacctaa
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