Cryptomeria japonica (Japanese cedar): 131028675
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Entry
131028675 CDS
T10556
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131028675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131028675
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
131028675
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131028675
mRNA degradation factors
5'-3' decay
Decapping complex
131028675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
131028675
NCBI-ProteinID:
XP_057814996
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All DBs
Position
4:complement(682678671..682679663)
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AA seq
330 aa
AA seq
DB search
MDFTYYFFRSCDTFKTYHASNVDDILDEFMAFKHFVPVAGSIILDQSNQRCLLVKGWKGG
SWSFPRGKREDPEEEDHICAIRESMEEVGYDISPLLNVNDFSEHSERKKRVVLYIIKGVN
ENYPFEPRTKKEVSEIVWHPLPIMKKRPNRYFMVGPFLDKLENWIKRNYTPSSTTPLSET
SEICIIWKVDKEQNNWTPRTFSAKPGARIDTPSSFQMGPSTPCREVQNSIPNSAQKRPST
PRWSKSNLNEKRSSSHCWNSQIKSPHPSSSPCSNRSPYPKTNSCYSSTSPYPLRSPSAST
YSNNSPYIPFKYRSPYHRRMEASDVFLWKK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacctattatttttttaggagttgtgatacatttaaaacttaccatgctagc
aatgtagatgatatacttgatgaattcatggcctttaagcactttgttccagtagcaggc
tcaatcattttggaccagtccaatcagaggtgtttgcttgtgaagggttggaagggtggt
tcttggagtttccctaggggaaagagggaagaccctgaagaagaagatcacatatgtgct
attagagaatcaatggaagaggtaggatatgatataagtccacttttgaatgtcaatgac
ttcagtgagcattctgaaaggaagaaacgagtggttttgtacattatcaaaggagtgaat
gagaattacccttttgaaccaaggaccaagaaggaagttagtgaaattgtttggcatcca
ctcccaatcatgaaaaagaggcccaataggtattttatggttggcccatttctagacaaa
ttggagaattggattaaaagaaattacacaccctcatctacaacaccactgagtgaaact
agtgagatatgcattatttggaaagttgataaagaacaaaataattggactccaaggacg
ttttccgcaaaacctggtgctagaattgatactcctagcagttttcaaatgggtccttcg
actccttgcagagaggttcaaaatagtatccctaattctgctcaaaagcgtccttccact
cctagatggagtaaaagtaatctcaatgaaaagcgttcttccagtcattgttggaattct
caaattaaatctcctcatccaagtagttcaccttgttcaaatagatctccttatcctaaa
accaactcttgttattcaagtacttctccttatccacttagatctccttctgcaagtact
tattcaaataattctccttatattccatttaaatatcgttctccttatcatagaagaatg
gaggcttcagatgtatttttgtggaaaaaataa
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