Cryptomeria japonica (Japanese cedar): 131028725
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Entry
131028725 CDS
T10556
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00900
Terpenoid backbone biosynthesis
cjf01100
Metabolic pathways
cjf01110
Biosynthesis of secondary metabolites
Module
cjf_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131028725
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cjf01006
]
131028725
Enzymes [BR:
cjf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131028725
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131028725
2.5.1.29 geranylgeranyl diphosphate synthase
131028725
Prenyltransferases [BR:
cjf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131028725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
131028725
NCBI-ProteinID:
XP_057815047
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All DBs
Position
5:742433420..742434406
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AA seq
328 aa
AA seq
DB search
MAGTGRTLARSLHRITEKCMHRGALYPPSKLRSLCTAVEESTEFELRTYWASVSASVNMA
VDGVLPVGYPEKIHEAMRYSLLSAPPKMPCPLLCTAACHVIGGTRKQSLPAATAVAMLHA
ATLAHDELPCMDSVAPHGGHVPNYTVFGEDVAILAGDALFGLAFQHLVESKVGLVEATLR
ALAELARGMGSTGLVAGQHMGSVAARSGTAVDPTLLEYIHFHKAALMAEISVVVGGIVGG
GSNGDVERLRGYGRSVGLMYQIVEDMLHMNGASQGPDRVTYPKVHGMERSRFIVDELNVK
AKDFLSPFAHTLAAPLLSFADYAATRSY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacaggaagaactctagccagatctctgcaccgcattactgaaaaatgcatg
cacagaggagcattgtacccaccttccaagctgcgatctttgtgtacggcggtggaggag
agcaccgagttcgaactcaggacctactgggcctcagtgagcgcttctgtaaacatggcg
gtggacggcgtgttaccagtgggatacccagaaaagatccacgaagccatgcgttactcg
cttctgtcggcgccgccaaagatgccatgcccgctgctctgcaccgccgcctgccacgtc
atcggcggcaccaggaagcagtccctgccggcagcgacggcggtggcgatgctgcacgct
gccacgctggcacatgacgagctcccctgcatggacagcgtggcaccccacggaggccat
gtccccaactacaccgtctttggtgaggacgtggcaattctagctggggatgctttgttt
ggcttggcatttcagcacttggtggagtctaaggtgggactcgtggaggccacgttgagg
gcacttgctgagttggcgaggggcatggggtccacaggcctggtggcagggcagcatatg
gggtcggtggcggctagaagtggcaccgccgtcgatccgacacttcttgagtatattcat
tttcacaaggcggcactaatggcggagatttcggtggttgttgggggtatcgttggaggt
gggtcaaatggtgatgtcgagaggcttaggggctatgggaggtctgtggggcttatgtac
caaattgtggaggacatgctccatatgaatggggcatctcaaggaccggatagggtcact
taccctaaagttcatgggatggagaggtctaggtttatcgtggatgagctcaatgttaaa
gcaaaggattttctctcaccttttgcccacactttggcagcgcctctcttgagttttgct
gactatgctgctacaaggtcttattag
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