Cryptomeria japonica (Japanese cedar): 131028829
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Entry
131028829 CDS
T10556
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020
RNA polymerase
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131028829
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131028829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131028829
NCBI-ProteinID:
XP_057815164
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Position
5:complement(242489308..242709706)
Genome browser
AA seq
1175 aa
AA seq
DB search
MASKTENNEEISFKALQELVKPHIDSFNYFAEEGLETAVSNIRSVVVQQPGTLSKLRMWL
EKPEILSPDKEGSEGRHSRRLLPYECRQSGTSYRGKFYLEICFQWNDGNVIREKFSFGRL
PIMLKSNLCNLCDVKPDQLVDLKEEATEMGGYFICNGLERLIRLLIMPKRNYPLGVQRSS
YRNRGPEFTDKAVVTRCTRADQSSVTNRLYYLHNGSANLGFSMRRREFLIPVGIVLKALI
DTSDREIYLQLTSTYNELYQGQKGAVGTQLVCQRVEIILDEVKRYALFTRLQCLKFIGER
FQPMMEGMETESHYAVGERVIEDYILVHLDSCSDKFNLLIFMLQKLFALVDETAAPDNPD
TLQNHEVLLPGHLLTIYVKEKLQEWLFKVRAQLLREMQDTSSEFVLQDINKVKKVMEKVP
SGSISKVIENMLNTGNLNTQSGLDLQQSSGMTVIAEKLNFFRFLSHFRSVHRGAYFAQMR
TTTVRKLLPESWGFMCPVHTPDGSPCGLLNHLTAMCRITSDTDSELKFKDYMKLRKSITN
VLIDYGMIPVLPRLERGGPPEILSVLLDGRVIGYLNSLTIEGAVKHLRSLKLSKTSEVPE
DLEVGYVPCTFSGAYPGLYLFTTSARFIRPVKNLLNASNGQPDIELIGPFEQVYMEINCI
DGGNGGRREDDFPATHQEIHPTAMLSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFPSQS
IQFRSDNKLYRLQTPQTPIARTIGYKKYDIDEFPTGTNAIVAVLAYTGYDMEDAMILNKS
SVERGMCHGQIYQTETIDLTENRERHDRILKLFARSNKDASLSRFIDTDGLPYIGQILQS
GDPYCTVLNTVTAQSRTYKLKGSETAVVDYVAAVGTKPKDPLQKVKIRVRRGRNPIIGDK
FSSRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLQ
GKFVDATPFARLTGQEHTKKNSASGSAVDDYGQVLASYGFNYHGTEVLYSGILGTELACE
IFLGPVYYQRLRHMVSDKFQVRSMGPVNPVTRQPVKGRKVGGGIRFGEMERDSVLAHGAA
YLLRDRLHISSDYHVADVCSKCGGLLSTSPVLQKERSDALTSLPLGSINAKKVTCHVCKS
SQAIETVAMPYVFRYLAAELAAMNIKMALKVSDAA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaaacagaaaacaatgaggagatttcctttaaggcgctgcaagagctggtt
aagccgcacattgattcgttcaactattttgcagaggagggattggaaactgctgtttca
aatattcgctccgtggtcgttcaacagcccggcactctttcaaagctaagaatgtggtta
gaaaagccagaaatattatcaccagacaaggaaggaagcgagggacgccattccaggcgt
ttgctaccttatgagtgcaggcaatctggcacttcatatagaggtaaattttatttggaa
atttgtttccaatggaatgatgggaatgtaataagggaaaaattttcttttgggcgtctt
ccaataatgttaaagtcaaatctttgtaacttgtgtgacgtcaagccggatcagttggta
gacttgaaggaggaagcaactgaaatgggcggatattttatttgcaatggattggaacgg
cttatacgtttactaatcatgccaaaacggaattatccattaggggtgcagcgaagttca
tatcgaaatcgaggtcccgaatttactgataaagctgtagtcacaaggtgtacaagggca
gatcaatcttctgtgacaaatcgactttattatctccacaatggtagtgcaaatcttgga
ttttcgatgagaaggcgcgaatttcttattcctgtgggcatagtattaaaggcccttatt
gacactagtgatcgtgaaatatatttgcaattgacatcaacatataatgaactctatcaa
ggtcagaagggggccgtgggcacacagcttgtgtgtcaacgagtagagattatactagat
gaagttaagcgatatgccctcttcacccgtcttcagtgcttgaagtttattggagaacgc
tttcaaccaatgatggaaggaatggaaactgaaagccattacgctgttggagaaagagta
atcgaggattatattctggtccatttggatagttgcagtgacaaattcaatcttctgatc
ttcatgttacaaaagctttttgcacttgttgatgaaactgctgcaccagacaatccagac
acattacagaatcatgaagttttgctacctggtcacttgctgactatttatgtaaaggag
aagctccaagaatggttatttaaggttagggcacaacttttgcgggagatgcaggatacg
agttctgaatttgttcttcaagatataaataaggtgaagaaggtgatggaaaaggttcct
tcggggagtattagcaaagtcattgaaaatatgctaaataccggaaatctcaatactcag
tctggtcttgatcttcaacagagttctggaatgactgtcattgcggagaagctcaacttt
ttccgttttctttcacatttccgatctgttcacagaggagcatactttgcacaaatgcga
actactacagtgcgcaagctgcttccagagtcatggggctttatgtgtcctgtgcacaca
ccagatggatctccatgtggacttctaaaccatttgacagctatgtgtagaatcacatca
gatactgattcagaattaaagttcaaagattatatgaaactacggaaatcaatcacaaat
gttctgatagactatggtatgatccctgtgctgccaagattagaacgtggtggtcctcca
gaaattttgagtgttcttcttgatggtcgggtcattggatatcttaattcgttgacgatt
gaaggagctgtcaaacacctgcggagtttgaagctttccaagacatctgaggttccagag
gatcttgaggtgggatatgttccgtgtacattttctggtgcatatcctggactatatctt
tttaccacatctgcaagatttattcgaccagtgaagaatcttttgaatgcaagcaatggc
cagccagacatagaacttattggtccatttgagcaggtctatatggaaataaactgtatt
gatggtggtaatggaggaagaagagaagatgattttccagcaactcaccaagaaattcac
cctacagcaatgctaagtgttgttgctagtcttactccgtggtctgatcacaatcagagt
ccacgtaacatgtatcagtgccagatggcaaagcaaactatgggattcccttcgcaatct
atacagttccgtagtgacaacaaactctatcgtttgcaaacgcctcaaacacctatagcc
cgtacaataggctacaaaaagtatgacattgatgagtttcctacggggacaaatgcaatt
gttgctgtacttgcttatacagggtatgatatggaagatgcgatgattctgaataaatct
tctgtggagcgtgggatgtgccatggacagatctaccagacagagactattgacctgacg
gagaatcgagaaagacatgaccgcatcttgaaattgtttgcaagatctaataaggatgca
tcgctcagccgttttattgatactgatggtcttccttatattggccagattcttcaatca
ggggatccttattgtactgtattaaatactgtgactgctcagagcagaacatacaagctt
aagggttccgagactgctgttgttgattatgtagctgcagttggaacaaagccaaaggat
ccattgcaaaaggtcaaaatacgtgtccgccgtggccgaaatcccatcattggtgacaaa
ttcagtagtaggcatggacagaagggagtttgctcacaattgtggccagatattgatatg
ccattttcagcagtaacaggaatgcgtccagatcttattattaatccacatgcatttcct
tctcgaatgactattgggatgctcctagagtctattgctgccaagggtggtagcctccaa
gggaagtttgttgatgcgacaccatttgcaaggttaacagggcaagaacatactaagaaa
aatagtgcctcaggttctgctgttgatgattatggtcaggttctagcttcttatggattt
aattaccatggaacagaggtcctatatagtggcatccttggcacagagctcgcttgtgaa
atattcctcggtccagtgtactatcaacggcttcgacatatggtttcagataaatttcag
gtgcgttccatgggacctgttaatccagtcactagacaacctgtgaaaggtcgcaaggtt
ggtggaggtattcgttttggagaaatggagcgcgattcagttcttgcccatggagcagct
tatttacttcgtgatagacttcatataagctcagattatcatgtggcagatgtttgctca
aaatgtgggggtttattgtcaacttcgcctgtccttcaaaaggaaagaagtgatgcactg
acgagtctacctttgggcagcatcaatgccaagaaggtaacctgccatgtgtgcaaatca
agccaggccattgagacggtggcaatgccatatgtattcaggtatttggcagcagagttg
gcagcaatgaacatcaagatggctctcaaggtctctgatgcagcgtga
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integrated database retrieval system
