KEGG   Cryptomeria japonica (Japanese cedar): 131028839
Entry
131028839         CDS       T10556                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    131028839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131028839
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    131028839
SSDB
Motif
Pfam: IMS IMS_C IMS_HHH_1 BRCT BRCT_2 LIG3_BRCT IMS_HHH POLH-Rev1_HhH PTCB-BRCT UBM RTT107_BRCT_5
Other DBs
NCBI-GeneID: 131028839
NCBI-ProteinID: XP_057815181
LinkDB
Position
5:complement(240462990..240652634)
AA seq 1263 aa
MSHGRASLRPNSKRKRASDGNRTLGMVWGANSVSSSKSKGSAAFKDFGSYMSEKERKLRL
QFQSEAENSLPNDAITDLPSTSENVSGTGNSNGLFGGISIFVDGFTIPSNQELRNYMIRY
GGRYENYFSRERVTHIICSNLPNSKIKNLRSFSRGLPVVKPQWIVDCIGANKILHVGPYQ
LECLANECPQQQRLSTFFSVKSNSLTESNIGTEFKVVSTCSGPESSLNGETSERKNDCYS
KSQEEILQESHTVSTSAQNILAKGANLNEENVQILNHEFQIPCLLNLKEYDISNHGDACG
ENEISEYDIFRSENNEDISNSMEATESRLSITKYRSHSTLEDANFVENYFKNSRLHFIGT
WRNRYRKRFAGKSSEEIQGQYTGVDSSSNTTSVADSRVIIHVDMDCFFVSVVIRKHPELN
DKPVAVCHSDNPKGTAEISSANYPARGHGIRAGMFVRDAKALCPHLCILPYDFSAYEEVA
DHLYDILHKHCNRVQALSCDEAYLDVTGLHDPDHIALAIRQEIFDVTKCTASAGIAGNLL
LSRMATKRAKPNGQFHIRSKEVNEFLAYLPISELPGVGPTLQEKLNNQNVHNCSQLRSIS
KDVLQRDFGSKTGDMLWHYSRGIDHRQVQSAMEHKSIGAEVNWGVRFNNSEDVHHFLMKL
CNEVSLRLQGACMRGRMITLKVKKRKKGAGEPAKYMGCGICDNISHSVTVPSATDSTDVL
LRISRQLFASFHLDVKEVRGIGLQVLKLEAVESCHQGSGKNVLKSWLASMSKTPNSCELV
SISNEENGAAVCNLLQKNQLLLDMKDSNLMRDNGSGKGLQNAERYDAKVKWKGKSLEGGP
LPHISQLDPTVLACLPQEILSEINDFYNGKVLDYISGNGKVSERYSVPNMDVAYRQSTGT
GSTSRHLGDSVLEEHKRKNTEGDLKTMDCDKRQKTELKDHEELAQDVVASTTYSVDVPTP
SQLDPSVLLALPLSLRLEIQQHYSATNAVKKKNSPVNVQRKETSSRSQFSVSNPGKFGIA
KQGIHKKVLGKASSSNSHNPEFMGKSIDIVDRQTSNDDAVSLSLSQVDIKILQELPTDIQ
RYIKDSLPAHRPVVAPHENALPCKREDYDILNIEINEPTNSCVKVGLKGDTCCERSFCKG
NPPEWVNDFRLSSCVLLQLISECYCKDDCSKSLSSLLLCLISSLPEEFVSCTDIKEQSVT
KCSDLLKQYIREKVKYDIEEVHFCVRLLKRLNVKSEFWLAIYNTIIPTLQANVGETYGGN
LKL
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgagccacggaagagcttcacttcgtccaaattccaaaagaaagagagcaagtgatggg
aatagaaccctgggcatggtgtggggtgccaattcggtctcctcctccaaaagcaaaggc
agcgctgcattcaaggacttcggcagttatatgtctgagaaggaacgcaagcttaggctt
caatttcaatcagaagcagaaaacagtttacccaatgatgcaatcactgatttgccttcc
acatctgaaaatgtatctggtaccggaaattccaatggcttatttggtggtatttcaatt
ttcgtggatggatttaccataccttcaaatcaggagctacgtaattacatgattagatac
gggggacgatatgagaattacttctcaagagagagagttacacacatcatttgtagcaat
ctgcctaacagcaagataaagaatttaaggtctttcagcaggggactaccggttgtaaaa
cctcagtggatagtagattgtataggtgcaaacaaaattttacatgtgggaccctaccag
cttgaatgccttgctaatgaatgtccacaacagcaaaggctttctacatttttttctgtc
aaatccaattctcttaccgaaagcaacatagggactgaattcaaggtggtttccacatgc
agtggtccggagtcatctttgaatggagaaacatctgaaaggaaaaatgattgttacagc
aaatcacaggaagaaatattacaagaaagccatacagtatcgactagtgcacaaaatata
cttgccaagggagcaaatcttaatgaagaaaatgtccaaatattaaaccatgaattccag
attccttgtttgttgaacttgaaagaatatgatatttctaatcatggagatgcatgcggt
gaaaatgaaatatcagaatatgacattttcaggtcagaaaacaatgaggatattagtaac
tcaatggaagcaacagaatcacgactctcgataaccaaatacagatcacattcaacccta
gaggatgctaattttgttgaaaattatttcaagaattcaaggttgcatttcataggtacc
tggagaaatcggtaccgtaaaagatttgcaggaaaatcttccgaagaaatacagggtcaa
tatacaggagtagattccagctctaatactacttctgttgctgatagtcgtgttattatc
catgttgatatggattgcttctttgtatctgttgtgatcagaaaacatcctgaattgaat
gacaaacctgtagctgtatgccattcagataatcctaaagggactgctgaaatttcttct
gcaaattatcctgctcgtggtcatggcatcagggcaggaatgttcgttagggatgccaag
gctttgtgtcctcatctttgtattcttccttatgacttcagtgcatatgaagaggttgcc
gatcacctttatgacattcttcacaagcactgtaacagagtacaagcattaagctgtgat
gaggcatatttggatgtgacaggtttgcatgatcccgatcacattgcattagctattagg
caagagatatttgatgtgacaaaatgcactgcaagtgctgggattgctggaaatttgttg
ttatctcgtatggctacaaagagagctaagccaaacggtcaatttcatattcgatccaag
gaggttaatgaattcttagcatatcttcctataagtgaacttccaggagtgggacccaca
ttgcaagaaaagttgaataatcaaaatgttcataattgcagtcaattgcgcagcatatcc
aaggatgttcttcaaagagattttggttccaagactggtgacatgttatggcattacagc
agaggaattgaccatcggcaggtgcaaagtgctatggagcacaagtccataggtgctgag
gtgaattggggtgtgcggttcaacaattctgaagatgttcaccattttctaatgaaacta
tgcaatgaggtttcattgcgcttacaaggtgcttgcatgcgaggtcgtatgatcacactc
aaggtgaagaaacgaaagaaaggtgcaggcgaacctgccaaatatatgggctgtggcatt
tgtgataatatcagtcactctgttacggttccttctgctacggatagcacagatgtactt
ttgaggatcagtcgacaactttttgcatcatttcacctagatgtcaaagaggtaaggggc
atcggtctgcaagtattgaaattagaagcagtagaatcatgccatcaaggttctgggaaa
aatgtcttgaagtcatggcttgcttcaatgtcaaagacgccaaattcatgtgaattagtt
tctatttcaaatgaagaaaatggagctgctgtatgcaatctacttcagaaaaatcaactt
ctgttggatatgaaagattcaaacttaatgagagacaatggttcaggaaagggattgcaa
aatgctgaaagatatgatgccaaagttaaatggaaaggaaagagccttgaaggtggtcct
ttgccacatatttcgcagctggacccaacagttcttgcatgtcttcctcaggaaatactt
tcagaaatcaatgatttttataatggaaaagttcttgattatatctcagggaatggcaag
gtctcagagagatatagtgtgccaaatatggatgtagcttataggcagagtacaggaaca
ggtagtacaagtcgacatttaggggactctgtgttagaagagcacaagagaaaaaacaca
gaaggtgatttaaaaaccatggactgtgacaagcgtcagaagactgaactgaaagatcat
gaagaactagctcaagatgttgttgcttctacaacctactcagttgatgtaccaacacca
tcacagttggatccttctgtacttttggccttgccattgtccttgcgtcttgagattcag
caacattatagtgctactaatgcagtaaaaaagaagaatagccctgttaatgttcaaaga
aaagagacttcaagcagatctcagttcagtgtatcaaatccaggaaagtttggaattgca
aagcagggtattcacaaaaaggttctgggcaaagcaagctcctcaaattcacacaaccct
gaattcatgggtaagtcgattgatatagttgataggcagaccagcaatgatgatgctgta
tctctctctttgagtcaagtggatatcaagattttgcaggaactaccaactgatattcag
cgttatataaaggattctcttcctgctcatcgaccagtggtggccccacatgaaaatgca
ttgccatgtaaaagggaagattatgacatcctcaatattgaaattaatgaacccactaat
tcttgtgtgaaagttggtctgaaaggtgatacatgctgtgaaagaagcttttgcaaagga
aatcccccagaatgggtgaatgattttagacttagcagctgtgtattgcttcaactgata
tcggaatgctactgtaaagacgactgttccaaatctctctcttctcttttgctatgtctg
atatcctcacttccagaggaatttgtttcgtgtacagatataaaggagcaatctgttaca
aaatgttcagatctactcaaacagtatatcagggaaaaagtaaaatatgatattgaggag
gtccacttttgtgttcgtttacttaaaaggttgaatgtcaaatcagagttttggttagcc
atatacaacacaattataccaactttgcaggccaatgttggagagacttatggaggaaat
ttgaagctttga

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