Cryptomeria japonica (Japanese cedar): 131029029
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Entry
131029029 CDS
T10556
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131029029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjf02000
]
131029029
Transporters [BR:
cjf02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
131029029
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
131029029
NCBI-ProteinID:
XP_057815399
LinkDB
All DBs
Position
10
Genome browser
AA seq
537 aa
AA seq
DB search
MMDQDDHVEGGSDGGESDYVNVKVETDCDCSGGSLTSLPIPLSGWPQTFARSMDIYASSP
SLHGMGPLGSSGLEQDTLLCSSNHQNQEEAEAVSPLDDSNVYLKEPLLSQSRTNLEECCE
KEKEYWGSGASLTIQNSGHGNSEGSSFIRASVNGMNVLAGVGILSTPYALFNGGWMGISI
LFLFALICCYTGILLKRCMDVNTQIQSYPDIGHTAFGQTGRIVVSIVLYLELYSVAVEFL
ILEGDNLAQLFPKMAMNIAGKSLNAHQSFVLFAALVILPTIWLRDLSLLSYISAGGVVAS
VVVVLSVAWVGAFDGVGFHYSGSLWNPSGLPTVIGLYAFCYCGHAVFPNIYSSMKDRRQF
SSVLILCFIVCTFIYASIAVLGYLMFGNELLSQVTLNLPREKLASKVAICTTLINPFAKY
ALTLTPLSLALEELLPPSNTSSKTTLLLWSSCIRTLLLASTVVVALVVPLFGYLMALIGS
SLSCLVSFILPCLCYLKIFGARISRSEMILIYIILVVGITTAVVGTYSSVKNIADNI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcaggatgaccatgtggaaggcgggtcagatggaggagagtctgattatgtt
aatgtaaaagtagagacagattgtgattgtagtggtggatccctaacctctttgcctata
ccattgtcaggatggccacagacgtttgcaaggtcaatggacatctatgcaagctcgcca
tcgttgcatgggatggggcctttgggaagctctggtttagaacaggacactttgctctgt
tcttcaaatcaccaaaaccaggaggaagctgaggctgtttcgccattggacgattcaaat
gtgtatttaaaggagcctcttttgagtcaaagtcggacaaatttagaggaatgttgtgag
aaagagaaagagtattgggggagtggtgcttctctgactattcagaattcagggcatgga
aactctgagggcagttctttcatccgggcttctgtcaatggcatgaatgttcttgcaggt
gttgggattctgtctacaccatatgcacttttcaatggaggctggatgggaattagcatt
ctttttctttttgccttgatttgttgctacactggaattcttcttaagcgttgcatggat
gtgaatacacaaattcaaagctatccagacataggacacacagctttcgggcagactgga
agaatcgttgtatccatagtgctgtatttggaactttattctgtggctgtggagtttctg
atactagagggggataatttggctcagcttttccccaaaatggctatgaatatagcagga
aaaagcttaaatgcacatcagtcatttgttctctttgcagctctggttattttacctaca
atatggttacgcgatctgagtctgctatcatatatctcagcaggtggtgttgttgcatct
gttgttgtagttctatcagtagcttgggttggtgcgttcgatggggttggatttcactat
agtggcagtttgtggaatcccagcggattgcctactgttattggtttatatgctttctgt
tattgtggccatgctgtgtttcccaacatctactcctcaatgaaagaccgtcgacagttt
tcttcagtgctgatattgtgctttatagtttgcacatttatatatgcgagcattgcagtg
ctgggatatctaatgtttggcaatgagttgttatcacaagtaacattgaacctcccaaga
gaaaaattggcctcaaaagtagcaatctgtacaacattgattaatccatttgctaaatat
gcattaactcttactccattgtctttggccttggaagagttattacctccatcaaatacc
tcatcaaaaacaacacttttactatggagctcatgtatcagaaccttactactggctagt
acagttgttgtagcacttgtagtaccacttttcggttacctaatggcattgattggctct
tcattgagctgtttagtttcttttattcttccatgcttatgctacttgaaaatttttggg
gcacgcatttctaggtctgagatgatacttatttatatcatcctggttgtgggcatcaca
acagctgttgtaggaacctactcttcagtgaaaaatattgcagataatatataa
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