Cryptomeria japonica (Japanese cedar): 131029116
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Entry
131029116 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131029116
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131029116
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131029116
MMR (mismatch excision repair)
131029116
DSBR (double strand breaks repair)
HR (homologous recombination)
131029116
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131029116
NCBI-ProteinID:
XP_059064758
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Position
1:140198503..140200463
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AA seq
603 aa
AA seq
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MPMPMRMNEVEQHLQLTPHALLCINAGDDVPSPLLQLLSFEKLIDDENDNARYKVVLSDA
THMQLAILPPKYSGLLLSETLKIGTILSLTAYACRNVWNSRTIIIFSLAVKFTNSPLLGK
PRYLFKEQEQQMLGRDAPATTKRSLKFGIHLPPVQHESSVNISPIKALNPFQNKWTIKGR
VTNKRKMHQYSTPKSTGQVFSFDMIDSEGTEIRITCFGDVAEMHYHRVEPGTYYTVSKGC
VKEANTKWNKLNSHLEITLDNNSILKRCDDVVECEANNSQFTPINEITYCTNNTLVDVIG
IVVAVGEPSLIRRKDGSEVTKRIVKINDASAFTIDVNLWGETWQGLGEDLKSMHTTQAAV
VLAVRNARVGYFNGKVVNTTTATTLNINPSIPETETLMSRGKISDALLPQSCVAGQLNSQ
YSRMTITAVLERTSVLSETVESTIRAVVRIIKTDSFCYPACPLKFNGKECKKKCTQQSDN
QWFCSRCQTAVPECNYKYLLQMKLQDHTGALWATAFDEVGTNILQISAKELYMLQYDLTT
QKMPQSIIKHVLLSSFVFTLSITTDMYNSEPRLKATITKVARIDYQAENALLLAEIAQMT
TTA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgccaatgcgtatgaatgaagtggaacaacatctacaattgaccccacatgca
ctgctctgcatcaacgctggggatgatgtcccctctccactgcttcagcttttgtctttt
gaaaaattgatagacgatgaaaatgacaatgcccgatataaggttgttttgtctgatgcc
acacacatgcaattggcgatcctcccacctaagtatagtggtttgctgctttcagagaca
ttaaagattggcactatcctatcattgacagcctatgcttgtagaaatgtttggaactca
aggactataataatattcagccttgctgtcaaatttaccaattctccattgcttgggaaa
cctagatatctgtttaaagagcaagaacaacaaatgttgggtcgagacgcacctgccaca
actaaacgatcccttaaatttggaattcacctcccacctgtgcagcacgaatcttctgtt
aatatcagcccgattaaagccttgaaccccttccaaaataaatggacaataaaggggcgt
gtgacaaacaagaggaagatgcatcaatacagtacaccaaagtccactggccaagtattt
agctttgacatgatagatagtgaaggtactgaaattaggataacttgctttggcgatgta
gcagaaatgcattatcatagggttgaaccaggaacatattatactgtgtcaaaaggttgc
gttaaagaagctaacactaaatggaataagcttaacagccatcttgagataactttggac
aacaattcaatattgaagcgttgtgatgatgttgttgaatgtgaagcaaataattctcaa
ttcacaccaatcaatgaaattacatactgcaccaacaacactttagttgatgttattggt
attgtagttgctgttggagaaccctcattaattcgcaggaaggatggaagcgaagtaaca
aagagaattgtaaaaataaatgatgcctcagcttttactatcgatgttaacttatgggga
gaaacatggcaagggctaggtgaagatttgaagagcatgcacacaacccaagcagctgtt
gtccttgcagtcagaaatgctcgtgttggttatttcaatggaaaggtggtcaacacaacc
acagcaacaaccctaaatataaacccttctatacctgaaacagagacacttatgtcaaga
ggaaagatttcagatgcccttctaccgcaatcatgtgttgctggccagcttaactcacag
tacagtaggatgacaatcacagccgttttagagcgtacaagtgttctctctgaaacagtt
gaaagtactattagggctgttgtgagaatcattaaaactgattctttttgctatccagcc
tgccctttgaaatttaatggaaaagaatgtaaaaagaaatgcacccagcaaagtgataat
caatggttttgttcaagatgtcaaactgctgtgccagaatgcaattacaaatacttattg
cagatgaagctccaagatcatacaggggctctttgggctactgcctttgatgaggttggc
acaaatatactgcaaatatctgccaaggagctttacatgctgcagtacgatttgactaca
caaaaaatgcctcagtccattatcaagcatgtccttttgtcttcctttgttttcacactc
tctattacaacagacatgtacaattcagaacccaggctcaaagcaacgataaccaaagtt
gccagaattgattaccaggctgaaaatgctcttttgcttgcagagattgctcaaatgact
acaactgcatag
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