Cryptomeria japonica (Japanese cedar): 131029359
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Entry
131029359 CDS
T10556
Name
(RefSeq) uncharacterized RING finger protein C548.05c
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131029359
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131029359
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131029359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-rbx1
Prok-RING_4
zf-C3HC4_4
zf-RING_4
zf-RING_10
RING_XB3-XBAT31
zf-ANAPC11
zf-Nse
Sina_RING
zf-RING_11
zf-RING_6
zf-P11
Motif
Other DBs
NCBI-GeneID:
131029359
NCBI-ProteinID:
XP_057815809
LinkDB
All DBs
Position
10:296979787..297070451
Genome browser
AA seq
203 aa
AA seq
DB search
MNGLRSKRDQISEVRSVQSESTKEATLVSNWSMGTNIAIVVLDDDDENDDEVVVSSSRTL
APARSAYSQQSGRDPVINEEDVELLLGFAVTTGTIKTSTDCNPRRKRSRVPVINTIDLCD
ESGEADQRCSKKVDVRSDEPKELKLTCAICMSTMDEETSTICGHIFCKKCITNAIQVQKK
CPTCRKRLTMKNIHRIYLSSSTV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggctgcggtcaaagcgtgatcagatatcagaagtgagatcagtgcagtcagag
tcaacgaaggaagccacgttggtgtctaattggagtatgggcaccaatattgctatagtt
gttctagatgatgatgatgagaacgatgatgaagttgttgtttcatcttccaggacatta
gctccagcaagaagtgcatattctcaacaaagtggtcgagatccagttataaatgaagaa
gatgtggaactcctacttggttttgcagtcactactgggacaataaaaacgtcaacagat
tgcaatccacgtcgtaaacgcagtagagttcctgtaataaacacaattgatctttgtgat
gaatcaggagaagctgatcaaaggtgttcaaagaaggtggatgtcagatctgatgaacca
aaggaactcaagctcacctgtgcaatttgcatgtctacaatggatgaagagacatcgact
atttgtggacacattttttgcaaaaagtgcatcacaaatgctatccaagttcagaagaaa
tgtccaacctgcaggaaaagacttacaatgaaaaatatccaccgcatctacctctctagt
agcactgtttga
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