Cryptomeria japonica (Japanese cedar): 131029516
Help
Entry
131029516 CDS
T10556
Name
(RefSeq) LOW QUALITY PROTEIN: indole-3-acetic acid-amido synthetase GH3.6-like
KO
K14487
auxin responsive GH3 gene family
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131029516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
131029516
NCBI-ProteinID:
XP_057816004
LinkDB
All DBs
Position
5:593111918..593114638
Genome browser
AA seq
591 aa
AA seq
DB search
MFEKARSARGRDRKALEFIENVTSKAEEVQREVLSAILTTDANTEYLQSYGLNGSSDREA
FKKALPLITYNDLKPHIQRIADGDTSPILCALPVTEFLRSSGTSEGEPKMLPTNTDYAEK
RNLFFGLVRAVRNQYVEELGDWNTLHFIFVRDEMKTAGGLVYRSATTSLYKSQRFRDAFH
CNLYTSPIECILCTDVYESMYSQLLCALLHRKQVMRMGALFANGFLMAIRVLEQHWTQLC
FHIESGILNKEIRDPFVREAVTKILQPDPNLAQLIRSECSNGRWEGTIRRLWPNAKYIDV
IVTGTMAQYIPILNYYRGGLPFVSNYYGFSXCXFGINLEPLCNPEDVSYTLLPNMGYFEF
LPLRKGESDEQDPQDDEELQELVNLVDVEVGQIYELVVTTYTGLYHYRMGDILLVTGFHN
EAPQFQFVCKKNVLLSIDFDNTSKVEIQSGVDSCLHNLEIIGSKLIDYTSYADISMTPSH
YVLFQELSFSSETMVEHHKSILEDCCLIIEESLNNTYKKSRVTAKSITPLEIRIVEEGTF
NKLMDYALDRGKSINQYKTPRCIQSISMLEILNSRVTHSYFSINFPSLIYK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaagctcgaagcgctagggggagagaccggaaagccttggaatttattgag
aatgtgactagcaaggcggaggaagtgcagagggaagtcctgtctgctattctcaccacc
gatgctaacacagaatacttgcagagttacggccttaatggaagcagcgatagagaggct
tttaagaaggctttgcccctcatcacgtacaacgatctcaaacctcacattcaacgcatt
gccgatggagacacttctccaatcctttgtgctcttcctgtcacggaatttctcaggagt
tcagggacatcggagggagagccaaagatgttgccaactaacacggattatgcagaaaaa
agaaatttattcttcggtcttgtcagggcagtcaggaatcaatatgtggaagaactgggc
gattggaatacattgcattttatttttgttagagatgaaatgaaaacggcagggggattg
gtgtaccgttcagctacgaccagcctttacaaaagccagcggttcagagatgctttccac
tgcaacctctacaccagccctatcgaatgtattctgtgcacggacgtttacgagagtatg
tactctcagctgctctgtgctctcctacacagaaaacaagtcatgagaatgggcgccctg
tttgctaatgggttcctgatggccatacgtgttctggaacagcattggacgcaattgtgc
ttccacattgaaagtggaatcctcaacaaagaaataagggacccttttgtaagagaggcc
gttaccaagattctccagccagacccaaatttggcccagttaatcagaagtgagtgctcc
aatggaaggtgggaaggcaccataagacgcttgtggcccaacgcaaagtatatcgatgtt
attgtgactggtacaatggctcaatacattcctattctcaattactacagagggggactt
cctttcgtctctaactactacggtttctcatagtgcncttttgggatcaatttggaaccg
ttatgcaatcccgaggatgtgtcatacacacttctccccaacatgggttattttgagttt
cttccattaaggaagggagaatctgatgagcaagacccacaagatgatgaagagctgcaa
gagttagtgaatctcgttgacgtggaagttggtcaaatctatgaactcgtggtcactaca
tatacaggattgtatcattatagaatgggagatatattattggtcacaggatttcataat
gaagctcctcaattccaatttgtgtgcaagaagaatgttctattgtcaattgattttgat
aacactagtaaagtagagattcaaagtggggtagatagttgtttgcataatttggagatc
attggtagcaaactcattgattatacaagctatgcagacatctctatgacaccaagtcac
tatgttttatttcaggagcttagttttagctcggaaacaatggttgaacatcacaaatca
attcttgaagattgttgcctaattatagaggaatctttaaataatacctataagaaatct
agggtaacggctaaatccattacacctcttgaaataagaatagtggaggagggaacattc
aataaattaatggattatgctcttgatagagggaaatctatcaatcaatacaaaacacct
agatgtatacaatccatttccatgcttgagattttaaactcaagagtcactcattcttat
tttagtattaatttcccaagcttaatttataagtaa
DBGET
integrated database retrieval system
