Cryptomeria japonica (Japanese cedar): 131029612
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Entry
131029612 CDS
T10556
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1 isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131029612
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjf01007
]
131029612
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131029612
Enzymes [BR:
cjf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
131029612
Amino acid related enzymes [BR:
cjf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
131029612
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131029612
Prokaryotic type
131029612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
DUF2226
Motif
Other DBs
NCBI-GeneID:
131029612
NCBI-ProteinID:
XP_057816150
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All DBs
Position
3:complement(283662268..283836361)
Genome browser
AA seq
687 aa
AA seq
DB search
MGEGCCGGAAAHPAGFKKDESYLTTIDSKRIKMFELIQAQQQQERQKIGGEPIRITLPDG
QVKEGKKWITSPMDIAKEISKGLAASALISEVNGTLWDLARPLEGDCQLKLFTFDSNEGR
DTFWHSSAHILGQSLEREYGCKLCIGPCTTRGEGFYYDAYYNDLTLNEEHFEKIKSWATK
AVAEKQPFERIEVSRQQALEIFAENSFKVEIINELPEDKTITVYRCGPLIDLCRGPHIPN
TSHVKAFACLKASSSYWRGKSDRESLQRVYGISYPDSKKLKEYLTQLEEAKKRDHRVLGQ
NQELFFFHPLSPGSCFFLPHGTRIYNKLMDFIRNEYRKRGYTEVISPNIYNMQLWETSGH
AANYKENMFVFEIEKQEFGLKPMNCPGHCLMFDNRVRSYRELPLRLADFGVLHRNELSGA
LTGLTRVRRFQQDDAHIFCARSQIKDEVQGVLDFLQYAYDIFGFTFELELSTMPEKHLGD
LETWKEAEAALAEALDSFGKPWQINEGDGAFYGPKIDITVFDALKRKFQCATIQLDFQLP
KKFKLSYSAEDEAKREEPVMIHRAILGSVERMLAILLEHYAGKWPFWLSPRQAIVCPVSE
KSSEYSLKVRDQIHEAGYFVDVDTSDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVR
IRDQSAHVVKCMDELLSLFKEDTEAFR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggttgttgtggtggcgcggctgctcaccctgcaggctttaagaaagatgaa
tcgtatctgactacaattgattcaaagcgcatcaaaatgtttgaactgatccaggcccag
cagcaacaagagcgtcaaaaaattggaggagagcctatcaggatcactcttcctgatggt
caagtgaaggaggggaagaaatggattacttctcctatggatattgcaaaggaaatctca
aaaggcttggctgcttctgctttgatatcagaggtaaatggtactctttgggacctggca
aggcctctggagggtgattgccaattgaaactgttcacatttgatagcaatgaaggacgt
gatacattttggcactctagcgctcacatccttgggcagtctcttgaaagggagtatggc
tgcaaattatgcattggaccctgcacaactagaggagagggattctactatgatgcctat
tacaatgaccttactttgaatgaggaacactttgaaaagatcaagtcttgggctacaaaa
gctgtggcggagaaacagccttttgagcggattgaagtatcaaggcagcaggcacttgaa
atatttgctgagaattcttttaaggttgaaattataaatgaattgcctgaggataagact
attacagtttataggtgcgggcctttgattgacctttgtcgtggtccacacattccaaac
acatctcacgttaaggcctttgcttgtttaaaggcttcatcatcctattggagaggcaaa
tcagatcgtgaaagcctgcaaagggtttatgggatttcgtatccagattcaaaaaaactt
aaagaataccttacccagttagaagaagctaagaaacgagatcacagggttctaggacaa
aatcaggaacttttcttttttcatccactcagcccaggaagttgcttctttctgccacat
ggtacaagaatttacaataagttgatggattttatacgaaacgaatataggaaaaggggt
tacacagaggtcatttcccctaacatatataatatgcaactctgggaaacatcagggcat
gcggctaattacaaagaaaacatgtttgtttttgagattgagaaacaggagtttggactt
aagcctatgaattgcccagggcactgcttgatgttcgacaacagagttcgatcctataga
gaattaccactccgcttggctgattttggtgttttgcatcgaaatgaactcagtggtgct
ttgacaggtctgactcgtgttcgacgatttcaacaggatgatgctcatatcttttgtgca
agatcgcagattaaagatgaggtccagggcgtgctagatttcttacaatatgcatatgac
atatttggctttacatttgaacttgagctatccactatgccagaaaaacacttgggagac
ctagaaacatggaaagaagccgaggcagctttagctgaagcattagattcatttggaaag
ccatggcagataaatgaaggggatggagcattttatgggccaaagattgacattactgtt
tttgatgctttgaaaagaaaatttcagtgtgcaaccattcagcttgattttcagcttcca
aaaaaattcaaattatcttactctgcagaggatgaagcaaagagggaggaacctgttatg
atacaccgggcaatacttggttctgttgagcgcatgcttgccatccttcttgaacattat
gcaggaaaatggccattctggcttagtcctcgccaagcaattgtatgtcctgtgtcagaa
aagtcgtcagagtattcactgaaggtccgtgatcagatccatgaagctggttattttgtt
gatgttgacacatctgacagaaagatccagaaaaaggtgcgggaagctcaattagctcag
tacaattatatcctggttgttggtgaggaggaagcaaacaccggacaggtaagtgttcgc
attcgggatcaatcggcacatgttgtaaagtgcatggatgaacttctgtcattatttaaa
gaggatacggaggcattccgttag
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