Cryptomeria japonica (Japanese cedar): 131029625
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Entry
131029625 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131029625
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131029625
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
131029625
TFIIIC, fungi type
131029625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_8
TPR_12
TPR_16
TPR_1
TPR_6
TPR_17
TPR_9
TPR_CcmH_CycH
ANAPC3
TPR_7
DUF7017
TPR_11
TPR_Slam
TPR_20
ARM_TT21_4th
TPR-S
ARM_TT21
TPR_15
TPR_4
TPR_10
ARM_TT21_5th
HAT_PRP39_N
SNAP
ChAPs
Suf
DUF6584
ARM_TT21_2nd
TPR_21
EST1_DNA_bind
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
131029625
NCBI-ProteinID:
XP_057816176
LinkDB
All DBs
Position
3:285852027..286010339
Genome browser
AA seq
952 aa
AA seq
DB search
METESIEAESMDDEQENEMQGAVNNNLSIDNMDIDLDELDFNFEEEGEGEGEGEVEVEGE
EEDEEDEEEYTLRFQGEMDPLAFAENDQSGAQPYEQFQRLEYETLAARKRKQHQLNRDDH
TKKATQKDLFGASMDEILEAANFGLGRREHKRKSKKSGRRKGEGPKLTPEVTRKLGEANL
LYATGRYDEAVDLLQDVIRLIPNVPDPYHTLALVYISLGDKTKAINFYMIAAHLTPKDSL
LWKRLASYSMEQGNTGQLIYCLTKAMKADPDDMAIKWDRASLYVDLNDYHRAAEAFDQIA
AYRPSDVEAWKMAAKMHHRSGQSQRAREVLEKLIDEHPSEADLTVVNLLAALHMENKTFS
RAIQHIEHARMIYCSGQGLPPELAIKAGICYAHLGNLEQAENFFEDLHAEQSEELAESII
DVADAYTSLGHHHRALEYYSMLEGTTPFENAHLWLKVAQCHAAVESYSDAIKFYYKALDG
MPDNVDVRLTLASLLIEHDRTDEAIQLLLPPQHIEQPTNDASNIDGRPWWSNGKVKKKLA
QIYQAQGKAELFVEAIASSIKETLYLETLNQKVRMKNKLPKSVLSERVKWLDDSHVDNVF
RGFRPILSTSDMNKALRARRRLAKLASRKEEKKAAALAAGLEWQSDSDDEELPEPVIKEP
PLPDLLKDEEHYELIIEICKALASLKRYWEALEIINHSLKLGHNHFCQEKQDELRSLGAQ
VAYNTTDPKNGYDCARYIVQQHPYSLGAWNCYYKVVSRLESRVGKHGKFMLAMRAKYPDC
VPPMVICGHQFAMISQSQGALREYLEAYKTQPDNPLINLCVGTSFINLALGFRVNNRNQC
VVQGFAFLYNYQRLCKNNQESNYNLARAYQHVGLVHLAVLYYEKVLAHYEKDHPIPKLPH
EDTCFVSEIEPKLENYGHCDLGKEAAYNLHLIYKNSGAVDLARQVLKDYCKT
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgagagcattgaagcagaaagcatggatgacgagcaggaaaatgaaatgcag
ggagcagtcaataacaatttgtccatagacaacatggacatagatttggatgaactggac
ttcaatttcgaagaagaaggagaaggagaaggagaaggggaagtagaagtagaaggagaa
gaagaagatgaagaggatgaagaggagtacactctgcgctttcagggggagatggacccc
ctcgcatttgcagagaacgatcagagcggagcacaaccatatgagcagttccagaggctc
gaatacgagaccctcgccgctcgcaaacgcaaacaacaccagcttaaccgggatgatcat
acgaaaaaagctacgcaaaaagacctctttggtgccagcatggatgaaattttggaggca
gcaaattttgggttaggaaggagagaacataaaagaaagagtaaaaagagtgggcgcaga
aagggagaagggcccaagttaactcctgaagtgacaagaaaactaggtgaagcaaatctt
ctttatgccacaggtcgctatgatgaggctgtagacctgctgcaagatgtcatacgtctt
attcctaatgtcccagatccctatcatacactagcacttgtctacatttcacttggtgat
aagacaaaagcaatcaatttttacatgatagctgctcatcttacacccaaagattccttg
ctttggaaacgacttgcttcctattccatggagcaaggaaacacaggccagctgatttat
tgtcttactaaagcaatgaaagcagatccagatgacatggctatcaaatgggatcgtgct
tccttgtatgtcgatcttaatgattaccacagggcagcagaagcatttgatcaaatagca
gcttatcgtccatctgatgtcgaagcatggaagatggctgcaaagatgcaccatagaagt
ggtcaaagtcaacgagcaagagaggttttagaaaagcttattgatgaacatccatcagag
gctgatctgactgttgttaacttgttggctgcactacacatggaaaataaaaccttttcc
agagcaattcaacatattgagcatgcacgcatgatttactgttctggacagggattacca
ccagaacttgctatcaaagcgggtatttgctatgcacaccttggaaatttggaacaagct
gagaatttttttgaggatctccatgcagaacaatcagaagagcttgcagaatcaataatt
gatgttgctgatgcatatacaagccttggacatcatcaccgtgctctggaatattatagt
atgctggaaggaacaaccccatttgagaatgctcatttatggttgaaggttgctcaatgc
catgcagctgttgagtcttactcagatgctataaaattctattacaaagctctagatggt
atgccagataatgttgatgtacgattgaccttagcatctctacttattgaacatgataga
acagatgaagcgatacaactacttttacctccacagcatattgagcaacctaccaatgat
gcaagcaacattgatgggcgcccatggtggtcaaatggaaaagttaagaagaagctagca
caaatttatcaggctcaaggaaaggcggaactttttgtagaggctattgcatcatcaatc
aaggagacgttatatttggagactttaaaccagaaggtcagaatgaagaataaattgcca
aagagtgttctatcggaaagggtgaagtggcttgatgatagtcatgtagataatgtattt
cgaggctttagacctattttatcaacatctgacatgaacaaagctctaagagcaagaaga
agacttgcaaaattggcttctagaaaggaagagaagaaagctgctgccttggctgcaggc
ttagaatggcagagtgattcagatgatgaagaacttccagaacctgtgataaaggagcct
cccttaccagatctgctcaaggatgaggaacattatgaactgattattgagatatgcaag
gcattggcatcattaaagagatattgggaagcattggaaatcataaatcatagcttgaaa
ttgggccacaaccatttttgtcaagaaaagcaagatgaacttcgttcattgggtgcacag
gttgcatacaatacaacggaccccaaaaatggatatgactgtgcacgctacattgttcaa
caacatccatatagccttggtgcatggaattgctactacaaagtggtttcgcgattggag
agtcgtgttgggaaacatggcaagtttatgcttgcaatgcgagcaaagtatccagactgt
gtaccaccaatggtgatatgtgggcatcaatttgctatgattagtcaatcgcaaggtgct
cttcgagagtatctggaagcatacaagacacagcctgataatccattgatcaatctgtgt
gttggaacatccttcatcaatttggctcttgggtttcgagttaacaaccgaaaccaatgt
gtcgtacaaggttttgccttcttatacaactaccaacgactatgtaaaaataatcaggaa
tctaattacaaccttgctcgtgcatatcagcatgtggggcttgtacatttggctgtttta
tattatgagaaggtccttgctcattatgagaaggatcatccaatcccaaaacttccacac
gaggatacatgctttgtatctgagattgaacctaagcttgaaaattatggacactgtgac
ttgggaaaggaggcagcttataatttgcatttgatatataaaaatagcggtgcagtggat
cttgcaagacaagtattgaaagactattgcaagacttga
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