Cryptomeria japonica (Japanese cedar): 131029682
Help
Entry
131029682 CDS
T10556
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03082
ATP-dependent chromatin remodeling
cjf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131029682
03083 Polycomb repressive complex
131029682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131029682
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131029682
Histone modification proteins
HAT complexes
HATB complex
131029682
HDAC complexes
Sin3A-HDAC complex
131029682
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131029682
PRC2.2
131029682
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131029682
Heterochromatin formation proteins
Other heterochromatin formation proteins
131029682
Chromatin remodeling factors
NuRD complex
131029682
NuRF complex
131029682
NuRF complex (fruit fly)
131029682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD_LRWD1
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
MIOS_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
131029682
NCBI-ProteinID:
XP_057816253
LinkDB
All DBs
Position
9:362214799..362329467
Genome browser
AA seq
396 aa
AA seq
DB search
MSVANPEEEDEYIIWKKNTPFLYDLVISHALEWPSLTVEWLPGHHEIPHSDYSSQQLILG
THTSDEEPNFLMIAEVRLPSPDSDSVGGFDSPSQKVKIIQQINHEDEVNRARYMPQNPSI
IATKTVNSDIYVFDHSKHPSKPPQQGGCNPEIILKGHDAEGYGLSWSPFKEGYLLSGSND
AQICLWDISASAGSKVLEAKNILKVHEGVVEDVSWHLKHEYLFGSVGDDRCLLIWDMRAP
LLDKPQESIVAHQSEVNSLAFNPFNEWVLATGSADKTIKLFDLRKLSCSLHTCSHHTEEV
IQIRWSPKNETILASSGGDQRLMVWDLSRIGEEQTPEDAEDGPPELLFIHGGHTSKISDF
SWNLNDDWVLASVAEDNIFQIWQMAENIYNDDDNRP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcaaacccagaggaagaggacgagtacatcatttggaagaaaaacactcca
tttttgtatgacttggtgataagccatgccctcgaatggccgtcactcacagtggagtgg
cttcccggtcaccacgagatcccccatagtgattactcatcgcagcagctaatcctcgga
actcacacctctgacgaggagcctaattttttgatgatagcggaggttcggcttccatct
ccggactctgattctgttggaggtttcgatagcccctcccaaaaggtaaaaataattcag
cagattaatcatgaagatgaagttaatagagctcgatacatgccacaaaatccctccatt
attgcaaccaagacggtgaactcagatatttatgtatttgatcacagcaaacatccatca
aagcctcctcaacaagggggttgcaatccagagataatattgaaaggtcatgatgctgaa
ggatatggcttgtcatggagccctttcaaggaaggttatctactgagtggttcaaatgat
gcacaaatatgcttgtgggacattagtgcttctgcaggaagtaaagtgcttgaggccaag
aatattttgaaggtccatgaaggggtcgttgaggatgtttcatggcatttgaagcatgaa
tacctttttggttctgttggagatgatcgttgtttgctcatatgggacatgcgtgcacct
ttgctcgataagcctcaagaatcaattgtggctcatcaaagtgaagttaactcattggct
ttcaaccccttcaatgagtgggtattagccactggatctgctgacaaaactattaagctg
tttgatctccggaaactttcctgctcattacatacctgttcccaccacacggaagaggtc
attcaaataagatggagtccaaaaaatgaaacaatattggcttcctctggtggtgatcaa
agacttatggtttgggacctcagcagaattggcgaggaacaaacaccagaagatgcagaa
gatgggccacctgagttacttttcattcatggaggacatacaagcaaaatatctgatttc
tcatggaatttgaatgatgactgggtactcgccagtgtagctgaagataatatttttcaa
atttggcagatggcagaaaatatttataatgatgatgacaacaggccctga
DBGET
integrated database retrieval system
