Cryptomeria japonica (Japanese cedar): 131029750
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Entry
131029750 CDS
T10556
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131029750
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131029750
Meiosis-specific proteins
Cohesin complex and associated proteins
131029750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
ABC_tran
GTP_EFTU
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
131029750
NCBI-ProteinID:
XP_059067007
LinkDB
All DBs
Position
9:complement(319624986..319863482)
Genome browser
AA seq
1217 aa
AA seq
DB search
MAGVGRIERVEVENFKSYAGHQVIGPLKRFTAIIGPNGAGKSNLMDAISFVLGVRSTNLR
GAHLRDLIYALDDKEKENPKGRKASVKLVYFTPSGEELHFMRSVSGTGASDYRINNKLVT
WDDYNNKMKSLGILLRARNFLVFQGDVESIASKNPKELTALFENISGSEEFKKDYEDLEE
QKGRAEEKSAFMYQKKRTIVAERKQKKEQKEEAEKHLRLQEQLKSLKQEHFLWQIFNIEK
DTERNGKELEVEKENLEDVSKSQEKFESEIKEKKKEQAAYLKEALLCEKKIAKRKVELDK
KQPELLKLKEEISRISQKIKSSGKELDKKKEDQRKQGKEIEKLRRDLEDFNASLNELNEH
GQEEGGKLQLADSQVKEYHKIKEEAGLKTAKLRNEREVYDRQQQADIEAQKNLEENLQQL
INREQQLETQEEQMQARLKRLLDALGKNSDELWKVQSELKQMQDKHRKSRTKYDNLKAKV
DEIEVQLRELKADKRESERDAKLSEAVESLKRLFPGVHGRMTDLCRPTQKKYNLAITVAM
GKFMDAVVVDDESTGKECIKYLKEQRLPPQTFIPIQAVRVKPIHEKLRTLGGSAKLVFDV
IQFDPALERAILYAVGNTLVCDGLDEAKSLGWGNERYRVVTVDGILLTKSGTMTGGITGG
MEARSQKWDDRAIEALKKNKERFESEMVELGSAREMQIKESEASGKISGLERKIQYAEME
KKTIEDKIVKLQQERENIRAETDRVKPELEKLKELISSRSKNILKIENRINEIVDRIYKD
FSQSVGVANIREYEETQLREAQEISERQLQLRSQMAKLKYQLEYEQRRDTGAPIQKLTSL
LSKLQEELKRVQNQEAEAKSSMNESGQQLDEMKKDAEELKVKADECESVIQELKKQANNV
TANIAKLKRQITAKETQIEQLKSRKQEILENCELEQIKLPTLSDPMEIDSSGPNFPVTNF
DYSKLSRSHQQDLRSADRDKLEAEFKSKMDSVMLEIERTAPNLKALDQYEALREKEREVI
EEFETARREEKEITDKYNSVKQKRYEKFMDAFSHISTNIDKIYKQLTQSNTHPFGGTAYL
SLENEDDPFLYGIKYTAMPPTKRFREMEQLSGGEKTVAALALLFAIHSFRPSPFFVLDEV
DAALDNLNVAKVAAFIRSKSCENHRDQDKNSVGFQSVVISLKDTFYDKADALIGVYRDSE
KCCSRTLTFDLTKYDEI
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgggaggatagagagagtggaagtggagaatttcaagtcgtacgcaggg
catcaggtgatagggccgttgaagaggtttacggccataattggccctaatggcgcaggc
aagtcgaacctgatggacgccatcagcttcgtgctgggcgtgcgctcaaccaacctcagg
ggagctcacctgagggaccttatctatgccttggatgacaaagaaaaggaaaatcctaaa
ggccgaaaggcctctgtcaagctcgtctatttcacgccctccggcgaggagcttcatttc
atgcgctctgtatccggcactggcgctagcgactaccgaattaataataagctcgtcaca
tgggacgactacaataacaagatgaagtctcttggcattctccttagagctcgcaatttt
cttgtatttcagggagatgttgaatctattgcttcaaagaatcctaaagagcttactgca
ctgtttgaaaacatatctggctcagaagaatttaagaaagactatgaagatctggaagag
cagaaggggagagccgaggagaagtcagcttttatgtatcagaaaaagagaactatagtt
gccgaaaggaagcaaaagaaagaacagaaggaagaggctgagaaacatctacgcttgcaa
gagcaattgaaatctttgaaacaagagcattttctatggcaaatttttaacattgagaag
gatactgagagaaatggaaaagagcttgaagtggaaaaagaaaatcttgaagatgtgtcc
aagtcacaagagaaatttgaatctgaaatcaaggagaaaaagaaagaacaggctgcatat
cttaaggaggccttgctttgtgaaaagaagatagcaaagagaaaggttgaactcgataag
aagcaaccagagcttctcaaattaaaagaagaaatttctcgcatctcacaaaaaattaaa
agcagtgggaaagagctggataaaaagaaagaagatcagagaaaacaaggaaaagagata
gaaaagcttcggagggacttagaagattttaatgcatctttgaatgaattgaatgagcat
ggccaggaagaagggggaaaactgcaattagctgatagccaggtcaaggagtaccataaa
ataaaggaagaagctgggttgaaaactgcgaagttgaggaatgagagggaagtttatgat
agacagcagcaagctgacattgaagctcagaagaatttggaagagaatctgcaacaactg
attaacagggagcaacagctagaaacacaggaggagcaaatgcaagctcgtttgaaacgg
cttcttgatgcattaggaaagaattcagatgagctatggaaagttcaaagtgaactgaag
caaatgcaagacaagcatcgtaaatcaaggacaaagtatgacaacttgaaggcaaaggta
gatgaaatagaagttcaattgcgtgaattgaaggctgacaaacgtgaaagtgaaagggat
gccaagctatcagaggctgttgaaagcttgaagcgtctctttcctggtgtgcatggtcgc
atgacagacctctgtaggcctactcagaaaaagtataatcttgcaattactgttgcaatg
ggaaagttcatggatgcagtggtagtcgatgatgaaagtactgggaaagaatgtatcaag
tatttgaaggagcaaaggcttcctcctcagacatttataccaattcaagcagtgcgtgtg
aaaccaatacatgagaagttacgcacattgggagggagtgcgaaactcgtctttgacgtt
attcaatttgatcctgccttggagagagcaattctgtatgcagtaggaaatacactagtc
tgtgatggccttgatgaagctaaatctcttggctggggcaatgagcgctatagagtggtt
actgttgatgggattctccttacaaaatctggtaccatgacgggtgggattactggtggc
atggaagcaagatcacagaaatgggatgatcgagcaattgaagctcttaaaaaaaacaaa
gagcgttttgaatcagagatggtagagctaggatctgcaagagaaatgcagatcaaagag
tcagaagcatctggaaaaatcagtggacttgaacgaaagattcagtatgctgaaatggaa
aagaaaactatcgaagataagatagtaaaactgcagcaggagagggagaatatcagagct
gagacggaccgggtgaagccagagcttgaaaagttgaaagaacttatttcaagcagaagc
aaaaacattctgaagattgagaacagaatcaatgagatagtggacagaatctataaagat
ttcagtcagtcggtgggcgtggcaaatattcgtgagtacgaggaaacccaattaagggaa
gcacaagaaatttctgaacggcagcttcagctgcgcagtcagatggcaaaactgaagtat
cagctggagtatgagcagaggcgggacactggagctccaattcaaaaattgacctccttg
ctgagtaaattgcaagaggagcttaaaagggtgcaaaatcaagaggctgaagcaaaatca
tcaatgaatgaaagtggacagcagctagatgaaatgaaaaaagatgctgaggagctgaaa
gtgaaggcagatgagtgtgaaagtgttatacaggaactgaaaaagcaagctaataatgtt
acagcaaacattgcaaaactgaagcgccagattactgcaaaggagacacaaattgaacag
ctaaaatctcgaaagcaggagatactcgagaactgtgaattggaacagataaaacttcct
accttatctgacccaatggaaattgattcgtcaggtcccaacttcccagtgacaaatttt
gattactcaaaacttagccgatctcatcaacaggatctgagatcagctgatagagataaa
cttgaggcagaatttaaaagcaaaatggactctgttatgttggaaattgagagaacagca
cccaatttgaaagcattggatcaatatgaggctttgagggagaaggaaagagaagtcatt
gaagaatttgaaacggctaggagagaagagaaggaaataactgataaatataattcagtt
aaacaaaagaggtatgaaaaattcatggatgcattcagccacatatctactaatattgat
aaaatctacaaacagctgacacaaagtaatacacacccttttggtggaacggcatatttg
agcctggagaatgaagatgacccatttttgtatggtattaaatatacggctatgccccca
acaaaacgcttcagggaaatggaacaattatctggaggagaaaaaactgtagctgctctt
gctttgctatttgctatccacagtttcaggccctccccatttttcgttctggatgaagta
gatgcagcattggacaacttgaatgttgcaaaagttgcagcatttatcagatcaaaatcc
tgtgaaaaccacagggatcaagacaaaaacagtgttggttttcaaagtgttgtcatttct
ctaaaagataccttctatgacaaggctgatgcattgattggagtctatagggactctgaa
aaatgctgctcgagaactctaacatttgacctaaccaaatatgatgagatataa
DBGET
integrated database retrieval system
