Cryptomeria japonica (Japanese cedar): 131029889
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Entry
131029889 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131029889 isoform X1
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131029889
Enzymes [BR:
cjf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
131029889
Ribosome biogenesis [BR:
cjf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
131029889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_25
GCD14
Methyltransf_17
Motif
Other DBs
NCBI-GeneID:
131029889
NCBI-ProteinID:
XP_057816530
LinkDB
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Position
3
Genome browser
AA seq
559 aa
AA seq
DB search
MARPDFFYSGISRTSRPHEVFRLSSCNPTNSLQTRTSHLLLCTTSLIATEQGNSSKPAKH
RHRPRKSKSKSVDKPKELKAKFVDKSKKLYSNVSPHRAASAVRLLRIDEQGAYADLLNAH
NSEIKYIHNTLGFRIKPLDARDARLVTDIVAGVLRWKRYLDYLIFSLYRQTKRANEIEPL
LQQILRIGVYEIVKLGMPPYAVVNENVTLAKAALRAGAGNMVNAILRKIVSCKENDTLPL
PAVEGDSRSKARALAVIYSHPVWMVRRWMSYLELEAMINLMEWNNDPPCFSLRANNNKGI
SRDVLVVLLNKLEVPYKLSPYLEEFVHLTTGLQNVIQAGLIKEGTCAVQDESAGLVVSVV
DPQPGETIVDCCAAPGGKTLFMASRLQGQGKIIAIDINQGRLRMVEEAAIIQALDSVVTT
CHNDICDFVQVGTSIQADKVLLDAPCSGLGVLRKKPDLRWKRSLKDLEQLMLLQDKLLDA
ASLLVKPGGILVYSTCSIDPGENKERVESFLSRHPEFIVESVKKLVPDEFVSEEGFYFSH
TSNHFLDGAFAARLYRITN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccctgatttcttttacagtggcatttccagaacaagtcgtccacatgaggtc
ttccgcctctcctcctgtaatcccacaaactctctgcaaacacgcacctcacatctatta
ctttgcacaacatccctcattgccaccgaacaaggaaattcttccaaacctgcaaaacac
cgtcacagaccaaggaaatcaaagtccaaatccgtggataaaccaaaggaattaaaggca
aaatttgttgataagtcaaagaaattatactccaatgtttcgcctcacagagcagcttct
gcagtgcggttattgaggatagatgagcaaggagcgtatgcggacttgctaaacgcccac
aatagcgaaattaaatacattcacaatactttaggattccgcatcaagccgctcgatgca
agggacgctagactggtaacagatattgttgcaggtgttctacggtggaagcgttatcta
gattatctgatattttcactgtacaggcagacaaaaagagctaatgaaatagaacctctt
cttcagcagatacttcgaattggtgtctatgaaattgttaagctaggcatgccaccatat
gctgtagtcaatgagaatgtgacacttgcaaaagcagcactgagagctggtgctggtaac
atggttaatgcaattctccgaaagatagtttcttgtaaggaaaatgatacacttccctta
ccagcagttgaaggtgattcccgctcaaaagcacgtgcccttgcagtaatatattcacat
ccagtttggatggtaaggcgttggatgtcttatctagaactagaagcaatgattaatctg
atggaatggaataatgatccgccttgcttcagtcttagagcaaataacaacaaaggaatc
tcaagagacgttctagtagtcttgctaaacaagctagaggtcccatacaagttatctccc
tacttggaagagtttgttcatctcacaactggattgcagaatgttatccaagctggattg
ataaaagaagggacatgtgcagtacaggatgaaagtgcaggactagtagtttctgttgtt
gatcctcaaccaggggaaactattgttgattgttgtgccgcacctggagggaagactttg
ttcatggcatcacgtctgcagggtcaagggaaaataattgcaattgatataaatcaagga
cgcttacgaatggttgaagaggcagcaataatacaagctttagatagtgttgtaactact
tgtcacaatgatatttgtgactttgttcaggttggaacctctatacaggctgacaaagtt
ctacttgatgctccttgtagtgggctcggtgtccttcgtaagaaaccagatttgcgttgg
aagagatcactgaaggatttagagcagctgatgttattacaagacaagctcttggatgca
gcctccttgttggtaaagcctggaggcattttagtttacagtacttgctcaatagaccca
ggagaaaacaaggaacgtgtcgaatcatttcttagtagacacccagagttcattgttgaa
tcagtaaagaaacttgttccagatgagttcgtatctgaggagggattctacttctcgcat
acaagtaatcattttcttgatggtgcatttgcagcacgcctgtatcgtattaccaactaa
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