Cryptomeria japonica (Japanese cedar): 131029973
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Entry
131029973 CDS
T10556
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
cjf03015
mRNA surveillance pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131029973
09122 Translation
03013 Nucleocytoplasmic transport
131029973
03015 mRNA surveillance pathway
131029973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131029973
03041 Spliceosome [BR:
cjf03041
]
131029973
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
131029973
Spliceosome [BR:
cjf03041
]
Common components
Common spliceosomal components
Cap binding complex
131029973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
131029973
NCBI-ProteinID:
XP_057816639
LinkDB
All DBs
Position
10:complement(622659457..622730670)
Genome browser
AA seq
246 aa
AA seq
DB search
MASLFKDPNQLSAYRDRRFSGTQDEFEHALRTSSTVYIGNLSFYTTEEQIYELFSRVGEI
KKIIMGLDKNTRTPCGFCFVLYYSREDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEARRQLVDYGVGSLGNFHGSASNSSYGGH
GGGHGGHGGSHRHGRDYGRKRYRSDDDRATDDGSKRSRTYDRESRPERNPRFRESGDSDE
DDNGRH
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttttcaaggacccaaaccagctttctgcatacagagatcgaagatttagt
ggaacacaggatgaatttgagcatgcacttcgcacttcttctactgtttatattgggaat
ctttccttttataccactgaagagcaaatctacgagctcttttctcgggttggagaaatc
aagaaaatcataatgggcttggataaaaatacaagaactccatgtggcttttgttttgtt
ttgtattactctcgagaggatgctgaggatgctgtgaaatatataagtgggactgttctt
gatgatcgtcctatccgtgtcgattttgattggggtttccaagaaggaaggcaatggggc
cgtggcagaagcggagggcaggttcgggatgagtaccgcactgattatgatcctggcaga
ggaggatatggaaagatggtgcagaaagagctagaagcacgcagacaacttgttgattat
ggtgtgggatcattgggcaattttcatggaagtgcctcaaattcttcatatggagggcat
ggaggaggacatggaggtcatgggggctcccatcgacatggtagagattatggtcgcaaa
cgctatcgatcagatgatgaccgtgcaacagatgatggatcaaaaaggagcagaacctat
gatcgagagtcaaggccggaaaggaatcctcgttttcgagagagtggtgattccgatgaa
gatgataatggaaggcactaa
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