Cryptomeria japonica (Japanese cedar): 131030052
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Entry
131030052 CDS
T10556
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131030052
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131030052
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131030052
Peptidases and inhibitors [BR:
cjf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131030052
Ubiquitin system [BR:
cjf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131030052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
131030052
NCBI-ProteinID:
XP_057816716
LinkDB
All DBs
Position
7:complement(759148865..759170529)
Genome browser
AA seq
1002 aa
AA seq
DB search
MHVFGKIELPGLFSATFAVIQLVFLIIILKWKGSPSSSTEEEEEMRKLVVVPANERSTFE
EEYMGNSSMEASSPYYKCAVCYSVAAKRCARCKAVRYCSGKCQILHWRGGHKEECQPLDK
CGSSFSIISTQKDKLDLASSFSGSKDLGSPGCNLKGQKVSSSVQNLDNYITEAPDISISN
FQQISISYGDREPACNNALDSVPKGSHRSNGGAQDALLGSHTKYSYMPVMPSSEVSAYEV
PANCSFHMSNIFSSSEANSKECVDSTINSVKSFSNISVSENPPNDMSLSMLSDGTTDCIT
NSIISEHDLHSCTNMPHDSSISENHMLDCHINGSPYNNFLNCSNSESNPSTSGIPFHESL
STRSHVMDASRHSASFHGSPGKRPELDGPCWRNFADDSSDSGIPSSVLENCNERLWLSGD
DASSSSNDTSAMSTQHELRSSGDSLSKGTFRRSIGTAIQYFSRQKAKAAPPTISSHLNVC
NDAILSSTPPTVGSSQNISNGFKRSVKKVLGRAKLSKVSKQTNSRAEEVIVKPSQILFRY
EYFVELFNCNTLELYPCGLINCGNSCYANVVLQCLTFTRPLAAYLLQGDHAQCCKRKNWC
LMCELEQLILTARQSKSPVSPTRILSRLQRMRSYLGYGRQEDAHELLRLSIEAMQSICLD
EAGGEKTVNPTTQKTTFMQQLFGGCLLSKVQCMRCHYESDRFENMLDLTVEIHGNIESLE
DALAQFTAPELLDGENKYKCDRCKSYVKAEKRLVVHEAPNILTIVLKRFKNGKFGKLNKH
VTFPEFLDMSPFMSGTADEPPLYMLYAVIVHLDMLNASFFGHYVCYVKDLHGTWYKIDDT
EVEPVTLDTVMAEGAYMLLYSRSSPRPPYVLKNGITQACMQAPLKHPNNSWQSLTTDGQN
KSCKMNAIQFSPLNLRTTRIDEIDSDIVWSSDDYVDDGWFTDIYGFNHENLASATTDWDV
HSTSREYTDYTYSETGSLFSGSDEASWSTDSYRDSTSTEGSC
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttttcgggaagatcgaactcccgggcttgttttcagccacctttgccgtaatt
cagctggtttttcttataattatattgaaatggaagggtagtcctagtagcagtacagaa
gaggaggaggagatgagaaagttggtggttgtgccagcaaatgagaggtctacgtttgaa
gaggaatacatgggaaattctagtatggaagccagtagcccttattataaatgtgctgtt
tgttacagtgttgctgcaaagcgctgtgcgagatgcaaggctgttagatactgctcagga
aagtgccagatattgcactggaggggaggccataaagaagaatgtcagccgctggataaa
tgcggttcttcattttcaattatttctactcaaaaagataaacttgatttagctagttca
ttttctgggtccaaggatttagggtctcctgggtgtaatttaaagggacaaaaagtctct
tcttctgttcaaaatttagataattatattactgaagcccctgatatatctatatcaaat
tttcagcaaatttctatatcatatggagatcgtgaacctgcatgtaataatgcattggat
tccgttcccaagggcagtcacagaagcaatggtggtgcacaagacgcgcttctaggatca
catacaaaatattcttacatgcctgtcatgcctagctctgaggtatctgcatatgaggtc
ccagcgaactgtagtttccatatgtccaatattttcagctctagtgaagccaattccaag
gaatgtgttgatagtaccatcaattctgtaaagtctttttcaaatatctctgtctctgaa
aaccctccaaatgatatgtccctttccatgctttctgatggaactacagattgtattact
aattccataatatctgagcatgatctccatagctgcacaaatatgccacatgacagttca
atctcagaaaatcacatgcttgattgtcatatcaacgggagcccatacaacaattttctg
aattgcagcaactctgaaagtaatccctcaacctcaggcattcctttccatgagtctcta
agtaccagaagtcatgtaatggatgcctcgagacacagtgcttctttccatggaagtcca
ggtaaaaggcctgagttggatggaccatgttggaggaattttgcagatgacagttcagac
tctggaattcctagctctgtattggaaaactgcaatgagagattatggctgtctggtgac
gatgcttctagttcttcaaatgacacaagtgccatgtcaacacagcatgaacttcggagt
tcaggggactctttatcaaagggaacattcaggcgatccattggaactgctattcaatat
ttttcacgacaaaaagcaaaggcagctccacccaccatttctagtcatttgaatgtctgc
aatgatgcaatattgtcctctacacccccaacagtgggttcttcacaaaacatcagcaat
ggctttaaaaggtctgtaaagaaagttctaggacgggcaaaattgtctaaagtgtcaaaa
caaacaaattccagagcagaagaggtcatagtaaaaccaagccagatactatttcgatat
gaatactttgtcgaactttttaactgcaatacactggaactctatccttgtggtctaatt
aactgcggaaacagctgctatgccaatgtagtcttacaatgccttacatttacaaggcca
cttgctgcctatttacttcaaggagatcatgctcaatgctgcaagaggaaaaattggtgt
ttaatgtgtgagcttgagcaacttattttaacagcaagacaaagtaaaagtcctgtatca
cctaccagaatactatcacgactacaaaggatgaggtcatacttaggatatgggagacaa
gaggatgctcatgaactcctcaggctttccattgaagctatgcagtcaatatgccttgat
gaagctggcggagaaaaaacagtaaatccaacaacacagaagacaacgtttatgcaacaa
ttgtttgggggctgtctcctgtcaaaggttcagtgtatgaggtgccactatgaatcagac
cgttttgagaatatgttggatctcactgtagagatacatggtaacattgaatctttagaa
gatgcacttgcacaattcacagcacctgagttgttagatggagaaaacaagtacaaatgt
gacagatgcaagtcctatgtgaaagctgaaaagcgcttggttgtgcatgaagctccaaac
attcttactattgtactgaagaggtttaagaatggaaagtttggtaaactaaacaagcat
gtcactttcccagaatttctagacatgtcaccctttatgagtggaactgccgatgagcca
cccctgtatatgctatatgctgtaatagtgcatttagatatgctgaatgcttcctttttt
gggcattatgtatgttatgtgaaggatttgcacgggacctggtacaaaattgatgacacc
gaggtagagcctgtaacgcttgatacagtaatggcagaaggtgcttacatgcttctttac
tcgaggtcttctccacgaccgccatatgttctaaagaatggaatcactcaagcttgcatg
caagcacccttaaaacatccaaataattcttggcaatcattaacaacagatggacaaaat
aaaagttgcaaaatgaatgccattcagttttctcccctgaacttaagaactacaagaatt
gacgaaattgattctgatattgtttggagttccgatgattatgttgatgatggatggttt
actgacatatatggtttcaatcatgagaaccttgcttcagccacaactgactgggatgta
cattcaacttctagggagtacacggattacacatacagtgaaactggatctctattcagt
ggctcagatgaagcatcttggagtacagacagctatagggattcaacgagcacagaggga
tcatgttga
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