Cryptomeria japonica (Japanese cedar): 131030328
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Entry
131030328 CDS
T10556
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131030328
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131030328
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
Helicases
131030328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
nSTAND3
ATPase
PhoH
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
131030328
NCBI-ProteinID:
XP_057817049
LinkDB
All DBs
Position
1:complement(678644527..678713155)
Genome browser
AA seq
1408 aa
AA seq
DB search
MGVASRSEDGDPCNAIILPSNHKSKHKDKIKVAKDRKKILLLSKKQQRKLRRLQEEKVKR
ERRATDLDILEKHKIQDDAHALLGSSGNLGQVETMREKLSRAMRLHRAGLLVPSDVPLFR
ERETDSNLMETKNSTDDSLPVKYNPNKNIRDAGKIQPKKRKRTALHTIVDGDRNDTFEDA
SMTATIDNQFKAKDMVTIQGHNIGQSDISINSCAEPVLSDSRNGYFSGAELENSQPSNKQ
GLLAAAKSIQLNTSSKSLTCLDSVDPIVQGGSARIKCEDGSSGWKVGVNKSFELTKEIKY
QVSEEERVKLDAQDSGRASKDLGWNPTSNSFVVHVTRPEEVEETRKNLPIVMMEQEIMEA
INQHPVVIICGETGCGKTTQVPQFLLEAGFGSSKCKARTGIIGVTQPRRVAVLATSKRVA
YEMSFQLGKEVGFQVRHDRRIGGNSSIKFMTDGILLREVQSDFLLRSYSVIVLDEAHERS
LNTDILIGILSRIVPLRQNLYDEQQKKISSGEIVSPENLVNPLKLVLMSATLRVEDFVSN
TKLFPVIPPVIEVPTRQFPVTVHFSAKTELDNYLGEAYKKVLAIHKKLPPGGILVFVTGQ
REVEFLCRKLRKAFGKRIKSNAKPVGIPQMTRSISDVDNFANQSDMEEIAEAVDTADENE
ISNGGFNRFNTYDDDGFDDKLQENSESSEIEFDSDSESEEEFLNDENDHLDKTLQNTSLL
REPGCVESLKAAFEALNGGDKSKKTNAKSNQHNLSDAHNKEHADQNSAGNLKEPGPLYVL
PLYAMLSAEAQLRVFAGVPEGERLVVVATNVAETSLTIPGIKYVVDTGRAKFKEYSCSSG
IAKYEIQWISKASAAQRAGRAGRTGPGRCYRLYSSAVFNNTLPDFPSPEISTAPIEGVVL
ILKYMGINKVANFPFPTPPDKTALVDSERCLNTLGALDQTTGRLMPVGEAMSLYPISPRH
SRMLLTVIQILKERDECAGASLVLAFAMAVAAALSVDNPFLIHFSSVAGKDTKDKQRGKD
TAVDKETEKQEHLEIKKQRAMAKAAYKMFENISSDALTVASALRSYELADNPEQFCRLNS
LHLKTMDEMSKLRKQLLRLVFNQEMQKKQKEDFTWTFGNLADVEFAWRESINKSLTSTQE
DILGQAICAGWADRVARRLRPLEGQRTRAVKYQACFVEEIVFLHSLSSVAKLAPEFVAYN
DLIQTIRPHMNDEAKPYMNGVTCIKSTWLALHARALCTFSKPFEDPRPYYDCLSDQVFCW
VSPTFGPHLWELPLDRSIMKNINHRTAVFACALLQGKVLPCLKEFQQFLAADPSMVLKPE
AKAHKRVSDLLHRLSVGPVVDSRIKLKSAWDADQKFLYVEILAWIQGKFHHLFDQLWKQM
QHESQLDCKQLFHKIIKKLSSKKEIKDW
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgccagcagatctgaagatggcgatccatgcaatgctattattcttcctagc
aatcataaatctaagcataaagataaaataaaggttgctaaagacaggaagaaaattctc
ttattgagtaagaaacagcaaagaaaattgagaaggctgcaggaggagaaggttaaaagg
gaaaggcgagctactgatcttgatatcttggagaagcacaagattcaagatgatgcacac
gctttgttaggctcatctggtaatcttggacaggttgaaactatgcgggagaaactctct
agggctatgcgcttacatagagcaggattgttagttccttcagatgttccactttttcgt
gaaagagaaactgattcaaatttgatggaaactaagaattcaactgatgatagtttgcct
gttaaatacaatccaaataagaatattcgggatgctggcaaaattcaaccaaagaaaaga
aaacggactgctttgcacacaattgtagatggagatcgaaatgatacatttgaggatgca
agcatgacagccactattgataaccaatttaaggcaaaagatatggtaacaatacagggg
cacaatatagggcagagtgacataagtataaactcttgcgcagaacctgttctatctgat
tctaggaatggttattttagtggagctgaactagaaaattcccaaccctctaataaacag
ggtttgcttgctgctgctaaaagtattcaactgaatactagtagcaaatctttgacatgc
ttggattcagttgaccctatcgtacaaggaggttctgctaggataaagtgtgaagatggt
agctcaggatggaaggttggggtaaacaagtcatttgaacttactaaagaaataaaatac
caggtttcagaggaggagagagtgaagctagatgcacaagacagtggcagggcttctaaa
gacttaggttggaatcctacaagtaatagctttgtagttcatgttacaagaccagaggaa
gttgaagaaacaagaaaaaatcttccaatcgttatgatggagcaggaaattatggaagct
atcaatcagcatcctgttgtgattatatgtggggagactggatgcggtaaaactactcaa
gttccacagtttctgcttgaagccggatttggttcaagcaagtgcaaagcaaggacagga
atcataggtgtcactcagccccgacgtgtagcagttcttgctacttccaagagagtggct
tatgaaatgtcgtttcagctgggaaaggaagttggatttcaagtgcggcacgatcgaaga
ataggagggaacagttccatcaagtttatgactgatggaattttgcttcgtgaagtgcag
tctgattttctattgaggagctactcagtcattgtgttggatgaggctcacgagaggagt
ttgaatacagacatccttattggaatactttcgcgaattgtacctctacggcagaattta
tatgacgaacaacagaaaaaaatatctagcggagaaatagtgagtcctgaaaacttggtt
aacccattgaaacttgttttaatgagtgcaacgctgagggttgaggattttgtttcaaat
accaagttatttcccgtaataccacctgtaatagaagtgcctacgagacagtttcctgtg
accgttcatttctctgccaagacagaactagataattatttgggagaggcttataaaaag
gttttagctattcacaagaagttgccaccaggtggtatactagtatttgtcacagggcaa
cgggaggtagaattcctgtgtaggaagctgcgaaaagcatttggaaagaggattaaaagc
aatgccaaaccagtgggcatccctcagatgacaaggtcaatttcagacgtagataatttt
gcaaatcaatctgatatggaggaaattgctgaagctgtagatactgctgatgaaaatgag
atttcgaacggaggatttaataggtttaatacatatgatgatgatggctttgatgataag
ttacaggaaaattcagaatcttctgaaatcgaatttgattcagattcagagagtgaagaa
gagtttcttaatgatgaaaatgaccaccttgataaaacattgcaaaacaccagcttactt
agagaaccaggatgtgtggaatcgcttaaagctgctttcgaagcactaaatggtggtgac
aaaagtaaaaaaactaatgcaaagtcaaaccagcacaatctttcagatgctcataacaaa
gaacatgcagaccaaaacagtgcaggaaacttgaaagagccaggccctctctatgtttta
cctctgtatgcaatgttgtccgcagaggcacagttacgtgtatttgctggagtaccagaa
ggagaaaggcttgttgtggtggccactaatgttgctgaaacttccttaacaattccggga
attaaatatgttgttgatacgggtagagcaaagttcaaggaatattcatgttcaagtgga
atagcaaaatatgagattcaatggattagcaaggcttcagctgctcagcgtgctggcaga
gcaggaagaacaggaccgggacgttgttatcgcctttattcatctgctgttttcaacaac
actttaccagattttccatcacctgaaataagcacggctcctattgagggtgttgttctt
attttgaaatacatgggtattaataaggttgccaacttccctttccctaccccgcctgac
aagacagccttagttgattctgaacggtgcttgaacacccttggagcactagatcagact
acaggaaggctgatgccagttggagaagcaatgtcattatatcctattagtcctcgccat
tctcgtatgcttttaactgtaattcagatactaaaggagagggatgaatgtgctggtgca
agcttggttctggcttttgcaatggctgttgctgcggcactaagtgtagataatcctttt
ctcatacattttagctcggtggctggaaaagatacgaaagataagcagaggggaaaggat
actgctgttgacaaagaaactgaaaagcaagaacacctagaaattaagaagcaacgtgca
atggctaaagcagcctataaaatgtttgagaacataagcagcgatgctttaacagttgca
agtgcacttcgttcatatgaacttgcagataatccagaacagttctgcagacttaactct
ttacatctgaaaacaatggatgaaatgtctaagcttcgcaagcaattgcttcggcttgtc
tttaaccaagaaatgcagaaaaaacagaaagaggactttacttggacttttgggaatttg
gcagatgtagaatttgcatggagggaatcaattaataaatctcttacgtcaactcaagaa
gatatattgggacaggcaatctgtgcaggttgggcggacagagttgcacgtcgtctaaga
ccattggaaggccaacggacaagggcggttaaatatcaagcctgttttgtggaagaaatt
gtttttctgcattccctatcatctgttgctaaactggcacctgagtttgttgcgtataat
gatctcattcagaccataaggcctcacatgaatgatgaggcaaagccttacatgaatggt
gtgacatgtattaagtcaacttggcttgccttgcatgcaagagctctctgcacattttct
aaaccatttgaagatcctcgaccatattatgactgcttgtcagatcaggtcttttgctgg
gtttctcctacatttggcccacatttgtgggagcttcctcttgacagatctattatgaag
aacataaatcatcggacagcagtgtttgcatgtgcacttcttcaaggaaaagttctgcca
tgtttgaaagaatttcaacaatttctggcagctgatccctcaatggtattgaaacctgag
gcaaaagcacacaaacgtgtcagtgatctccttcacagattgagtgtggggcctgttgtt
gatagtcgtatcaaacttaaatctgcttgggatgcagatcaaaagttcttgtatgttgaa
atattagcatggatacaaggtaaattccatcatctttttgatcagctatggaagcaaatg
cagcatgagtcccaattggactgtaaacaactatttcataagataatcaagaaactaagc
agcaaaaaggaaatcaaagactggtag
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integrated database retrieval system
