Cryptomeria japonica (Japanese cedar): 131030332
Help
Entry
131030332 CDS
T10556
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00061
Fatty acid biosynthesis
cjf00071
Fatty acid degradation
cjf01100
Metabolic pathways
cjf01212
Fatty acid metabolism
cjf04146
Peroxisome
Module
cjf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131030332
00071 Fatty acid degradation
131030332
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131030332
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cjf01004
]
131030332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131030332
Enzymes [BR:
cjf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131030332
Lipid biosynthesis proteins [BR:
cjf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131030332
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131030332
Exosomal proteins of breast cancer cells
131030332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131030332
NCBI-ProteinID:
XP_057817056
LinkDB
All DBs
Position
1:677646602..677738406
Genome browser
AA seq
659 aa
AA seq
DB search
MEKKFMVEMEPGREGINGEPSVSAVYRHIWAKDGFPPPLPGLSTCWEIFSAACKENASRR
MVGHREMNNGKAGKYVWQTYGEVYDQVLKIGAAMRACGVEPAGRCGIYATNCPKWVIAME
ACCGHNIICVPLYDTLGETAVGYILSHAEISIVFVQDIKIPELLKSLHKGTGQVKTLVSF
TRFTSEQEEEALRLEITVYSWEEFLKLGGENPTDLSLPLAQDISTIMYTSGTSGEPKGAI
LTHEALALTIAGAEYVFEHFDEKMTTDDVYLSFLPLAHIFDRIIEEFFFYRGASVGYWQG
DPKLLAEDLLELKPTCFAGVPKVFDRIYAGATKTIKESRITRRMIFSGLYNYKLKWLKQG
CKTHEASPLADAIFSRKIKARLGGRVRLILSGAAPLGNVVEEFLRVTLCCHVLQGYGLTE
TCGWSSVCLPDEFSMLGTVGPISPNTELRLESVPDMGYDALGAIPRGELCFRGKTLFSGY
YKRDDLTKEAYKDGWFHTGDIGEVQPNGTLKIIDRKKSLFKLSQGEYIAVEHLENVYALC
SYVEEIWIYGSSFESWLVAVVVPETVEIESWAKKNGLKGDFNKLCLEPKLKSFILEQLTD
IAKKNNLKGFEYIKAIHIDPQPFDVERNLLTPTNKKKRPQMAKYYEKQIEEMYLSLKTK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagtttatggtggagatggagccaggacgagaaggaattaatggtgaaccc
tccgtcagtgctgtttacagacatatatgggctaaggatggctttcccccaccacttcct
ggcttgtcaacctgctgggagattttcagtgctgcttgtaaagagaatgcctcaaggcga
atggttgggcatagggaaatgaataatggaaaggccggtaaatatgtatggcaaacatat
ggggaggtttacgatcaagttttgaagataggagctgccatgcgtgcatgtggcgtggag
ccagcaggaagatgtgggatttatgcaacaaattgccctaagtgggtaatagcaatggag
gcatgctgtggtcacaatattatatgtgttcctctctatgatacacttggagaaactgct
gttgggtacatcttaagccacgctgaaattagcattgtatttgttcaagatataaagatt
cctgaattgttaaagtccttgcacaagggtactggacaagtaaagactctggtttccttc
acaagatttaccagtgaacaagaggaagaagctctcagattggaaatcacagtatattcc
tgggaggagtttctaaaattgggaggggaaaatcctacagatctgtcactgcctctagct
caagatatctcaacaattatgtacacaagtggcaccagtggagaaccaaagggtgctatt
ctgacccatgaggcgcttgccttaactatagcaggagctgaatatgtttttgaacacttt
gatgaaaagatgacaactgatgatgtatatttgtctttccttcctttggctcatatattt
gatcgaattattgaggagttctttttctatcgaggggcctctgtgggatattggcaaggg
gatcctaaactactggcagaagatttactggagttgaagccaacttgttttgcaggtgtc
cccaaggtatttgatcgtatctatgcaggagcaacaaaaaccattaaggagagccgcata
acaaggagaatgatttttagtggtctctataactacaaacttaaatggttgaaacaagga
tgcaagacacatgaagcatcgcctttggcagatgccattttttctagaaagattaaagca
agactaggaggtcgggtacgcctgatattgtcaggagcagctcccctgggtaatgtagtg
gaggaatttttgagggtaactctttgttgtcatgttttgcaaggatatggattgacagag
acttgtggatggagttctgtttgtttaccagatgaattttcaatgttaggaacagttgga
cctataagtccaaacacagaactacgtcttgagtctgtcccagacatgggttatgatgca
ttgggagccattcctcggggagagctctgttttcgaggaaaaacattattctcaggatat
tacaagagagatgacctcactaaagaagcttataaagatggatggtttcatacaggggat
attggtgaagtgcagccaaatggaacattgaaaatcattgacaggaagaagagccttttt
aaactctcgcaaggagaatatattgcagtagaacatcttgaaaatgtttatgctctatgt
tcctatgtagaagagatatggatttatggcagcagctttgagtcatggcttgtagctgta
gttgtcccagaaacagtggagattgaatcttgggctaaaaagaatggtctgaagggtgat
ttcaataaactgtgcttggaacctaaactgaagtcctttatactcgaacagctgactgat
attgctaaaaagaacaatcttaaaggatttgaatacatcaaggccattcatatagatcct
caaccgttcgacgtggaaagaaatttactgactccaactaataagaaaaagagaccacaa
atggcaaaatactatgagaaacaaatcgaggagatgtacctgagtttgaagacgaagtga
DBGET
integrated database retrieval system
